RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SLC2A13Q96QE2 648 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 POPDC2Q9HBU9 364 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 NGRNQ9NPE2 291 aaKnown RBP24.43■■□□□ 1.5
SYMPK-212ENST00000598896 RBM12Q9NTZ6 932 aaKnown RBP24.43■■□□□ 1.5
SYMPK-212ENST00000598896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.43■■□□□ 1.5
SYMPK-212ENST00000598896 CALCOCO1Q9P1Z2 691 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 PCSK1NQ9UHG2 260 aa24.43■■□□□ 1.5
SYMPK-212ENST00000598896 GLI1P08151 1106 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 PCK1P35558 622 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 PITX1P78337 314 aaPredicted RBP24.42■■□□□ 1.5
SYMPK-212ENST00000598896 LLGL1Q15334 1064 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 TEX35Q5T0J7 233 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 SYPL2Q5VXT5 272 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 CYP4V2Q6ZWL3 525 aaPredicted RBP24.42■■□□□ 1.5
SYMPK-212ENST00000598896 ANKS1BQ7Z6G8 1248 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 ZWILCHQ9H900 591 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 USP18Q9UMW8 372 aa24.42■■□□□ 1.5
SYMPK-212ENST00000598896 MYO16Q9Y6X6 1858 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 TRIM66O15016 1216 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 DNAJB2P25686 324 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 HDAC4P56524 1084 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 ITIH3Q06033 890 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 SMARCB1Q12824 385 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 IFRD2Q12894 506 aaPredicted RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 DUSP4Q13115 394 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 DCAF6Q58WW2 860 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 KCNT1Q5JUK3 1230 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 C9orf50Q5SZB4 431 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 SEL1L2Q5TEA6 688 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 OTUD1Q5VV17 481 aaPredicted RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 POLNQ7Z5Q5 900 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 SCML4Q8N228 414 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 CENPIQ92674 756 aaPredicted RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 GOLGA1Q92805 767 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 RPGRIP1Q96KN7 1286 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 RANBP2P49792 3224 aaKnown RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 CCDC85CA6NKD9 419 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 SART1O43290 800 aaKnown RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 URODP06132 367 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 ATXN1P54253 815 aaKnown RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 MGAT5BQ3V5L5 792 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 ADAT2Q7Z6V5 191 aaKnown RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 KLHL23Q8NBE8 558 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 GPR152Q8TDT2 470 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 TBCBQ99426 244 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 SEPT5Q99719 369 aaPredicted RBP24.41■■□□□ 1.5
SYMPK-212ENST00000598896 HERPUD2Q9BSE4 406 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 AP1M1Q9BXS5 423 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 NAALADL1Q9UQQ1 740 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 NR2E1Q9Y466 385 aa24.41■■□□□ 1.5
SYMPK-212ENST00000598896 LTFP02788 710 aa24.4■■□□□ 1.5
SYMPK-212ENST00000598896 LONRF2Q1L5Z9 754 aa24.4■■□□□ 1.5
SYMPK-212ENST00000598896 EXD1Q8NHP7 514 aa24.4■■□□□ 1.5
SYMPK-212ENST00000598896 C2orf15Q8WU43 125 aaKnown RBP24.4■■□□□ 1.5
SYMPK-212ENST00000598896 IRGQQ8WZA9 623 aa24.4■■□□□ 1.5
SYMPK-212ENST00000598896 NT5C3BQ969T7 300 aa24.4■■□□□ 1.5
SYMPK-212ENST00000598896 MTIF3Q9H2K0 278 aaKnown RBP24.4■■□□□ 1.5
SYMPK-212ENST00000598896 TCRBV7S2A1N4TA0A589 114 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 PI4K2BG5E9Z4 385 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 TRUB2O95900 331 aaKnown RBP24.39■■□□□ 1.5
SYMPK-212ENST00000598896 HAPLN1P10915 354 aaPredicted RBP24.39■■□□□ 1.5
SYMPK-212ENST00000598896 NOS2P35228 1153 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 PGFP49763 221 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 USP46P62068 366 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 HADHQ16836 314 aaKnown RBP24.39■■□□□ 1.5
SYMPK-212ENST00000598896 SLC25A52Q3SY17 297 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 ZDHHC14Q8IZN3 488 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 RAPGEF5Q92565 580 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 UBXN4Q92575 508 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 RNF25Q96BH1 459 aaPredicted RBP24.39■■□□□ 1.5
SYMPK-212ENST00000598896 NPY6RQ99463 290 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 EPC1Q9H2F5 836 aa24.39■■□□□ 1.5
SYMPK-212ENST00000598896 PLXNA3P51805 1871 aa24.39■■□□□ 1.49
SYMPK-212ENST00000598896 ZRANB2O95218 330 aaKnown RBP eCLIP24.38■■□□□ 1.49
SYMPK-212ENST00000598896 KRT1P04264 644 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 KRT17Q04695 432 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 ELF2Q15723 593 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 NUP93Q8N1F7 819 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 ZBP1Q9H171 429 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 GREB1Q4ZG55 1949 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 KRT7P08729 469 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 RARAP10276 462 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 SULT1E1P49888 294 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 ZFYVE27Q5T4F4 411 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 BSPRYQ5W0U4 402 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 FAM109BQ6ICB4 259 aaPredicted RBP24.38■■□□□ 1.49
SYMPK-212ENST00000598896 BNIPLQ7Z465 357 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 SPRED2Q7Z698 418 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 SLC13A5Q86YT5 568 aaPredicted RBP24.38■■□□□ 1.49
SYMPK-212ENST00000598896 CCDC50Q8IVM0 306 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 ZNF461Q8TAF7 563 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 EDEM1Q92611 657 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 SLITRK1Q96PX8 696 aa24.38■■□□□ 1.49
SYMPK-212ENST00000598896 CHD7Q9P2D1 2997 aa24.37■■□□□ 1.49
SYMPK-212ENST00000598896 KRIT1O00522 736 aa24.37■■□□□ 1.49
SYMPK-212ENST00000598896 ABLIM3O94929 683 aa24.37■■□□□ 1.49
SYMPK-212ENST00000598896 ARHGEF15O94989 841 aa24.37■■□□□ 1.49
SYMPK-212ENST00000598896 NCAM1P13591 858 aa24.37■■□□□ 1.49
SYMPK-212ENST00000598896 MYOGP15173 224 aa24.37■■□□□ 1.49
SYMPK-212ENST00000598896 ATF6P18850 670 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms