RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 CHFRQ96EP1 664 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 ACP6Q9NPH0 428 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 TAB2Q9NYJ8 693 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 CFAP97Q9P2B7 532 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 NUDT5Q9UKK9 219 aa24.02■■□□□ 1.44
IRF3-220ENST00000598108 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.02■■□□□ 1.44
IRF3-220ENST00000598108 MRPS17Q9Y2R5 130 aaKnown RBP24.02■■□□□ 1.44
IRF3-220ENST00000598108 KMT2EQ8IZD2 1858 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 BECN2A8MW95 431 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 GABBR2O75899 941 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 EEF1GP26641 437 aaKnown RBP24.01■■□□□ 1.43
IRF3-220ENST00000598108 SLC8A3P57103 927 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 KCNMA1Q12791 1236 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 ARHGAP44Q17R89 818 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 EML3Q32P44 896 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 ENOSF1Q7L5Y1 443 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 RALGPS2Q86X27 583 aaPredicted RBP24.01■■□□□ 1.43
IRF3-220ENST00000598108 WBP2Q969T9 261 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 CLDN23Q96B33 292 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 PRRX2Q99811 253 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 CYLDQ9NQC7 956 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 ANAPC1Q9H1A4 1944 aa24.01■■□□□ 1.43
IRF3-220ENST00000598108 IFNAR2P48551 515 aa24■■□□□ 1.43
IRF3-220ENST00000598108 TKTL1P51854 596 aa24■■□□□ 1.43
IRF3-220ENST00000598108 KRT31Q15323 416 aa24■■□□□ 1.43
IRF3-220ENST00000598108 SLC35F5Q8WV83 523 aa24■■□□□ 1.43
IRF3-220ENST00000598108 ULBP1Q9BZM6 244 aa24■■□□□ 1.43
IRF3-220ENST00000598108 ECT2Q9H8V3 914 aa24■■□□□ 1.43
IRF3-220ENST00000598108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24■■□□□ 1.43
IRF3-220ENST00000598108 NAGPAQ9UK23 515 aa24■■□□□ 1.43
IRF3-220ENST00000598108 COL4A2P08572 1712 aa24■■□□□ 1.43
IRF3-220ENST00000598108 ZNF638Q14966 1978 aaKnown RBP24■■□□□ 1.43
IRF3-220ENST00000598108 H0Y858 1186 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 PES1O00541 588 aaKnown RBP23.99■■□□□ 1.43
IRF3-220ENST00000598108 MDM4O15151 490 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 RARGP13631 454 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 PLA2G4AP47712 749 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 NCAPHQ15003 741 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 PM20D1Q6GTS8 502 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 PMF1Q6P1K2 205 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 BHLHA9Q7RTU4 235 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 SHC3Q92529 594 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 SECISBP2LQ93073 1101 aaKnown RBP23.99■■□□□ 1.43
IRF3-220ENST00000598108 MSANTD3Q96H12 275 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 KLF16Q9BXK1 252 aaPredicted RBP23.99■■□□□ 1.43
IRF3-220ENST00000598108 DNAJC12Q9UKB3 198 aa23.99■■□□□ 1.43
IRF3-220ENST00000598108 M0QYV0 167 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 SETSIPP0DME0 302 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 CHRNB1P11230 501 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 RGS7P49802 495 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 MYL5Q02045 173 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 PON2Q15165 354 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 NAIF1Q69YI7 327 aaPredicted RBP23.98■■□□□ 1.43
IRF3-220ENST00000598108 KCTD13Q8WZ19 329 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 FAM81BQ96LP2 452 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 NACA2Q9H009 215 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 VPS16Q9H269 839 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 HSD3B7Q9H2F3 369 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 LMAN1LQ9HAT1 526 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 LRRC4Q9HBW1 653 aa23.98■■□□□ 1.43
IRF3-220ENST00000598108 LETM1O95202 739 aaPredicted RBP23.97■■□□□ 1.43
IRF3-220ENST00000598108 ZBED1O96006 694 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 ATP5C1P36542 298 aaKnown RBP23.97■■□□□ 1.43
IRF3-220ENST00000598108 USP8P40818 1118 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 PTPN5P54829 565 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 ADIGQ0VDE8 80 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 STILQ15468 1287 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 DENND1BQ6P3S1 775 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 TICRRQ7Z2Z1 1910 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 DDX42Q86XP3 938 aaKnown RBP eCLIP23.97■■□□□ 1.43
IRF3-220ENST00000598108 ADGRG2Q8IZP9 1017 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 KIAA1958Q8N8K9 716 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 ATP2A3Q93084 1043 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 FBRSL1Q9HCM7 1045 aaKnown RBP23.97■■□□□ 1.43
IRF3-220ENST00000598108 CLIC5Q9NZA1 410 aa23.97■■□□□ 1.43
IRF3-220ENST00000598108 E2F8A0AVK6 867 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 FOXN3O00409 490 aaPredicted RBP23.96■■□□□ 1.43
IRF3-220ENST00000598108 NCAM2O15394 837 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 GREM1O60565 184 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 PNMA6AP0CW24 399 aaPredicted RBP23.96■■□□□ 1.43
IRF3-220ENST00000598108 IRF1P10914 325 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 GJA4P35212 333 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 RPS9P46781 194 aaKnown RBP23.96■■□□□ 1.43
IRF3-220ENST00000598108 PSEN1P49768 467 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 NHLH1Q02575 133 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 ANO6Q4KMQ2 910 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 C10orf120Q5SQS8 335 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 KLHDC7AQ5VTJ3 777 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 KLHDC10Q6PID8 442 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 C1orf228Q6PIY5 440 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 CPA6Q8N4T0 437 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 ZNF276Q8N554 614 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 ZNF606Q8WXB4 792 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 RBM12Q9NTZ6 932 aaKnown RBP23.96■■□□□ 1.43
IRF3-220ENST00000598108 CACNA1HO95180 2353 aa23.96■■□□□ 1.43
IRF3-220ENST00000598108 PIK3R2O00459 728 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 RALAP11233 206 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 LCP1P13796 627 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 ZNF18P17022 549 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 GPD2P43304 727 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms