RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 SPECC1LQ69YQ0 1117 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 KLHDC10Q6PID8 442 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 VSTM4Q8IW00 320 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 CELF5Q8N6W0 485 aaKnown RBP21.36■■□□□ 1.01
PNKP-211ENST00000598020 ARL14EPQ8N8R7 260 aaPredicted RBP21.36■■□□□ 1.01
PNKP-211ENST00000598020 USP13Q92995 863 aaPredicted RBP21.36■■□□□ 1.01
PNKP-211ENST00000598020 CYP2S1Q96SQ9 504 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 RNF38Q9H0F5 515 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 NMUR1Q9HB89 426 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 TRPC7Q9HCX4 862 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 TDP1Q9NUW8 608 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.36■■□□□ 1.01
PNKP-211ENST00000598020 OSER1Q9NX31 292 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 ARHGAP26Q9UNA1 814 aa21.36■■□□□ 1.01
PNKP-211ENST00000598020 SART1O43290 800 aaKnown RBP21.35■■□□□ 1.01
PNKP-211ENST00000598020 AP5Z1O43299 807 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 PRAMEF12O95522 483 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 CYP1A1P04798 512 aaPredicted RBP21.35■■□□□ 1.01
PNKP-211ENST00000598020 MMEP08473 750 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 LCP1P13796 627 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 SNX16P57768 344 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 ZBED6P86452 979 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 FMO1Q01740 532 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 SFMBT2Q5VUG0 894 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 TAF3Q5VWG9 929 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 TRIM72Q6ZMU5 477 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 PASD1Q8IV76 773 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 MFSD6LQ8IWD5 586 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 C1orf131Q8NDD1 294 aaKnown RBP21.35■■□□□ 1.01
PNKP-211ENST00000598020 SLC20A1Q8WUM9 679 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 DEPDC1BQ8WUY9 529 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 SYN2Q92777 582 aaPredicted RBP21.35■■□□□ 1.01
PNKP-211ENST00000598020 RSPRY1Q96DX4 576 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 PPP1R13BQ96KQ4 1090 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 CDK5RAP1Q96SZ6 601 aaKnown RBP21.35■■□□□ 1.01
PNKP-211ENST00000598020 KXD1Q9BQD3 176 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 PLA2G2FQ9BZM2 168 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 PDCL3Q9H2J4 239 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 ST7Q9NRC1 585 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 NAGPAQ9UK23 515 aa21.35■■□□□ 1.01
PNKP-211ENST00000598020 HEPACAM2A8MVW5 462 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 COCHO43405 550 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 TLR5O60602 858 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 GYPCP04921 128 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 CKMP06732 381 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 RALAP11233 206 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 PSMC3P17980 439 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 PRKCIP41743 596 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 YWHAGP61981 247 aaKnown RBP eCLIP21.34■■□□□ 1.01
PNKP-211ENST00000598020 ARID5AQ03989 594 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 TRIM14Q14142 442 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 VITQ6UXI7 678 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 TADA2BQ86TJ2 420 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 UBALD2Q8IYN6 164 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 KIAA1958Q8N8K9 716 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 ZNF397Q8NF99 534 aaPredicted RBP21.34■■□□□ 1.01
PNKP-211ENST00000598020 CPXM1Q96SM3 734 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 TRIM5Q9C035 493 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 CCSER2Q9H7U1 834 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 MUTYHQ9UIF7 546 aa21.34■■□□□ 1.01
PNKP-211ENST00000598020 LUC7L2Q9Y383 392 aaKnown RBP21.34■■□□□ 1.01
PNKP-211ENST00000598020 HELZP42694 1942 aaKnown RBP21.33■■□□□ 1.01
PNKP-211ENST00000598020 YJEFN3A6XGL0 299 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 E5RJQ4 531 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 E7ENQ6 273 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 TNFRSF10AO00220 468 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 DPYSL4O14531 572 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 PAPSS1O43252 624 aaPredicted RBP21.33■■□□□ 1.01
PNKP-211ENST00000598020 RARGP13631 454 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 NOMO3P69849 1222 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 PLCB2Q00722 1185 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 FCHO2Q0JRZ9 810 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 ASIC2Q16515 512 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 SCUBE3Q8IX30 993 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 ST13P5Q8NFI4 369 aaPredicted RBP21.33■■□□□ 1.01
PNKP-211ENST00000598020 NDRG1Q92597 394 aaKnown RBP21.33■■□□□ 1.01
PNKP-211ENST00000598020 LRRC3BQ96PB8 259 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 AGPAT1Q99943 283 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 SYT11Q9BT88 431 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 SMG9Q9H0W8 520 aaKnown RBP21.33■■□□□ 1.01
PNKP-211ENST00000598020 DUSP12Q9UNI6 340 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 CCL26Q9Y258 94 aa21.33■■□□□ 1.01
PNKP-211ENST00000598020 DCXO43602 365 aa21.32■■□□□ 1
PNKP-211ENST00000598020 ATP5C1P36542 298 aaKnown RBP21.32■■□□□ 1
PNKP-211ENST00000598020 GABRB2P47870 512 aa21.32■■□□□ 1
PNKP-211ENST00000598020 PTPN20Q4JDL3 420 aa21.32■■□□□ 1
PNKP-211ENST00000598020 BSPRYQ5W0U4 402 aa21.32■■□□□ 1
PNKP-211ENST00000598020 E4F1Q66K89 784 aaPredicted RBP21.32■■□□□ 1
PNKP-211ENST00000598020 BEND5Q7L4P6 421 aa21.32■■□□□ 1
PNKP-211ENST00000598020 BPIFB1Q8TDL5 484 aa21.32■■□□□ 1
PNKP-211ENST00000598020 SLC2A4RGQ9NR83 387 aa21.32■■□□□ 1
PNKP-211ENST00000598020 ABCC13Q9NSE7 274 aa21.32■■□□□ 1
PNKP-211ENST00000598020 CUL9Q8IWT3 2517 aa21.31■■□□□ 1
PNKP-211ENST00000598020 PI4K2BG5E9Z4 385 aa21.31■■□□□ 1
PNKP-211ENST00000598020 PIK3R2O00459 728 aa21.31■■□□□ 1
PNKP-211ENST00000598020 MBL2P11226 248 aaPredicted RBP21.31■■□□□ 1
PNKP-211ENST00000598020 SRFP11831 508 aa21.31■■□□□ 1
PNKP-211ENST00000598020 UNGP13051 313 aaPredicted RBP21.31■■□□□ 1
PNKP-211ENST00000598020 ALADP13716 330 aa21.31■■□□□ 1
PNKP-211ENST00000598020 CASP14P31944 242 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms