RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ZNF687Q8N1G0 1237 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 KIAA1958Q8N8K9 716 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 UBA3Q8TBC4 463 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 FAM3CQ92520 227 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
SSBP4-204ENST00000597724 LINC00597Q9H2U6 94 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 EBF3Q9H4W6 596 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 CYLDQ9NQC7 956 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 DUS2Q9NX74 493 aaKnown RBP17.62■□□□□ 0.41
SSBP4-204ENST00000597724 SMPD4Q9NXE4 827 aa17.62■□□□□ 0.41
SSBP4-204ENST00000597724 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSBP4-204ENST00000597724 MIA3Q5JRA6 1907 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 OTOL1A6NHN0 477 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-204ENST00000597724 PES1O00541 588 aaKnown RBP17.61■□□□□ 0.41
SSBP4-204ENST00000597724 ARSAP15289 507 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 BRD2P25440 801 aaKnown RBP17.61■□□□□ 0.41
SSBP4-204ENST00000597724 PSEN1P49768 467 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 TKTL1P51854 596 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 KCNMA1Q12791 1236 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 ARHGAP44Q17R89 818 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 EML3Q32P44 896 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 SMYD5Q6GMV2 418 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 C1orf228Q6PIY5 440 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 SCD5Q86SK9 330 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 DDX42Q86XP3 938 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSBP4-204ENST00000597724 ZNF276Q8N554 614 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 DTWD2Q8NBA8 298 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 SLC35F5Q8WV83 523 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 KCTD13Q8WZ19 329 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 CLDN23Q96B33 292 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSBP4-204ENST00000597724 TAB2Q9NYJ8 693 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 NDRG2Q9UN36 371 aaKnown RBP17.61■□□□□ 0.41
SSBP4-204ENST00000597724 WNT6Q9Y6F9 365 aa17.61■□□□□ 0.41
SSBP4-204ENST00000597724 BECN2A8MW95 431 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 NCAM2O15394 837 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 TBX18O95935 607 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 ZBED1O96006 694 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 CTHP32929 405 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 ATP5C1P36542 298 aaKnown RBP17.6■□□□□ 0.41
SSBP4-204ENST00000597724 IFNAR2P48551 515 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 TCF15Q12870 199 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 KRT31Q15323 416 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 PM20D1Q6GTS8 502 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 TXNDC11Q6PKC3 985 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 SHC3Q92529 594 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 CLIC5Q9NZA1 410 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 CFAP97Q9P2B7 532 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 NAGPAQ9UK23 515 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 DNAJC12Q9UKB3 198 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 AJAP1Q9UKB5 411 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-204ENST00000597724 CACNA1HO95180 2353 aa17.6■□□□□ 0.41
SSBP4-204ENST00000597724 RARGP13631 454 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 RPS9P46781 194 aaKnown RBP17.59■□□□□ 0.41
SSBP4-204ENST00000597724 NCAPHQ15003 741 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 ANO6Q4KMQ2 910 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 PMF1Q6P1K2 205 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 KLHDC10Q6PID8 442 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 CPA6Q8N4T0 437 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 ZNF606Q8WXB4 792 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 SECISBP2LQ93073 1101 aaKnown RBP17.59■□□□□ 0.41
SSBP4-204ENST00000597724 ATP2A3Q93084 1043 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 CHFRQ96EP1 664 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 NACA2Q9H009 215 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 VPS16Q9H269 839 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 ECT2Q9H8V3 914 aa17.59■□□□□ 0.41
SSBP4-204ENST00000597724 E2F8A0AVK6 867 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 M0QYV0 167 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 SLC9A3R1O14745 358 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-204ENST00000597724 LETM1O95202 739 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-204ENST00000597724 ZNF18P17022 549 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 PTMSP20962 102 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 USP8P40818 1118 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 MAGEA9P43362 315 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 PTPN5P54829 565 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 ADIGQ0VDE8 80 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 MEA1Q16626 185 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 KLHDC7AQ5VTJ3 777 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 BHLHA9Q7RTU4 235 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 KLF16Q9BXK1 252 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-204ENST00000597724 ULBP1Q9BZM6 244 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 NAT10Q9H0A0 1025 aaKnown RBP17.58■□□□□ 0.4
SSBP4-204ENST00000597724 HSD3B7Q9H2F3 369 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 ACP6Q9NPH0 428 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 LIMA1Q9UHB6 759 aaKnown RBP17.58■□□□□ 0.4
SSBP4-204ENST00000597724 DNMT3LQ9UJW3 386 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 NUDT5Q9UKK9 219 aa17.58■□□□□ 0.4
SSBP4-204ENST00000597724 FOXN3O00409 490 aaPredicted RBP17.57■□□□□ 0.4
SSBP4-204ENST00000597724 GABBR2O75899 941 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 NFATC1O95644 943 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 TPM2P07951 284 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 CHRNB1P11230 501 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 RALAP11233 206 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 GNA15P30679 374 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 GJA4P35212 333 aa17.57■□□□□ 0.4
SSBP4-204ENST00000597724 GPD2P43304 727 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms