RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 BEST2Q8NFU1 509 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 RMDN2Q96LZ7 410 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 HESX1Q9UBX0 185 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 DOCK3Q8IZD9 2030 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 KCNN4O15554 427 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 FGFR1P11362 822 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 KRT4P19013 534 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 LMO2P25791 158 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 RDXP35241 583 aaKnown RBP23.66■■□□□ 1.38
SRRM1-222ENST00000596378 ELK3P41970 407 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 HDAC4P56524 1084 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 FAM47CQ5HY64 1035 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 FUKQ8N0W3 1084 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 PCDH19Q8TAB3 1148 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 DNAJB3Q8WWF6 145 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 ACSS3Q9H6R3 686 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 USP29Q9HBJ7 922 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 GOLGA2P5Q9HBQ8 144 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 KLC4Q9NSK0 619 aa23.66■■□□□ 1.38
SRRM1-222ENST00000596378 TRIP12Q14669 1992 aaPredicted RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 DPYSL4O14531 572 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 DNAJC8O75937 253 aaPredicted RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 IQSEC1Q6DN90 963 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 CCDC33Q8N5R6 958 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 KLF6Q99612 283 aaPredicted RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 RNF39Q9H2S5 420 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 DERAQ9Y315 318 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 RRN3P2A6NIE6 340 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 SPTLC1O15269 473 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 TYROBPO43914 113 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 RBL1P28749 1068 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 ZNF200P98182 395 aaPredicted RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 MGAT5Q09328 741 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 MTFR1Q15390 333 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 ALKAL1Q6UXT8 129 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 PITPNM3Q9BZ71 974 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 C12orf65Q9H3J6 166 aaKnown RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 FAM124BQ9H5Z6 455 aaPredicted RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 SLCO1B3Q9NPD5 702 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 PRKAG3Q9UGI9 489 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 PIN4Q9Y237 131 aaKnown RBP23.65■■□□□ 1.38
SRRM1-222ENST00000596378 ARL2BPQ9Y2Y0 163 aa23.65■■□□□ 1.38
SRRM1-222ENST00000596378 GOLGA8RI6L899 631 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 APOL1O14791 398 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 DARSP14868 501 aaKnown RBP23.64■■□□□ 1.38
SRRM1-222ENST00000596378 STIP1P31948 543 aaKnown RBP23.64■■□□□ 1.38
SRRM1-222ENST00000596378 BCAR1P56945 870 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 KCNJ11Q14654 390 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 BOLA3Q53S33 107 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 MAP7D3Q8IWC1 876 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 AGGF1Q8N302 714 aaeCLIP23.64■■□□□ 1.38
SRRM1-222ENST00000596378 KBTBD7Q8WVZ9 684 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 FAF2Q96CS3 445 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 RAB6BQ9NRW1 208 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 CNTN3Q9P232 1028 aa23.64■■□□□ 1.38
SRRM1-222ENST00000596378 LCP1P13796 627 aa23.64■■□□□ 1.37
SRRM1-222ENST00000596378 XRCC4Q13426 336 aa23.64■■□□□ 1.37
SRRM1-222ENST00000596378 SPARCL1Q14515 664 aa23.64■■□□□ 1.37
SRRM1-222ENST00000596378 CYB5D1Q6P9G0 228 aa23.64■■□□□ 1.37
SRRM1-222ENST00000596378 LRRC52Q8N7C0 313 aa23.64■■□□□ 1.37
SRRM1-222ENST00000596378 PHACTR1Q9C0D0 580 aa23.64■■□□□ 1.37
SRRM1-222ENST00000596378 SMG5Q9UPR3 1016 aaKnown RBP23.64■■□□□ 1.37
SRRM1-222ENST00000596378 KBTBD13C9JR72 458 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 F2P00734 622 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 PDK2Q15119 407 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 ADGRD1Q6QNK2 874 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 DCAKDQ8WVC6 231 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 DHRS4Q9BTZ2 278 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 SENP1Q9P0U3 644 aa23.63■■□□□ 1.37
SRRM1-222ENST00000596378 NRCAMQ92823 1304 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 FAM110CQ1W6H9 321 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 FITM2Q8N6M3 262 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 SLC5A4Q9NY91 659 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 CPA4Q9UI42 421 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 SCN4AP35499 1836 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 PDCD11Q14690 1871 aaKnown RBP23.62■■□□□ 1.37
SRRM1-222ENST00000596378 SMIM28A0A1B0GU29 152 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 IQCA1LA6NCM1 817 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 A6NJR5 290 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 SETSIPP0DME0 302 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 SOX4Q06945 474 aaPredicted RBP23.62■■□□□ 1.37
SRRM1-222ENST00000596378 KLHL38Q2WGJ6 581 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 FBXO47Q5MNV8 452 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 OLFML2BQ68BL8 750 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 MZB1Q8WU39 189 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 PARK7Q99497 189 aaKnown RBP23.62■■□□□ 1.37
SRRM1-222ENST00000596378 FLRT1Q9NZU1 646 aa23.62■■□□□ 1.37
SRRM1-222ENST00000596378 TREHO43280 583 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 ZBED1O96006 694 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 GSTA1P08263 222 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 MSH2P43246 934 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 RASA2Q15283 850 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 SLC9A4Q6AI14 798 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 LVRNQ6Q4G3 990 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 APBB1IPQ7Z5R6 666 aaPredicted RBP23.61■■□□□ 1.37
SRRM1-222ENST00000596378 CCDC63Q8NA47 563 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 TEKT4Q8WW24 435 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 PPCSQ9HAB8 311 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 SMIM35A0A1B0GVV1 85 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 TCRBV9S1A1TA0A576 114 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms