RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 RNASE9P60153 205 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 YWHAZP63104 245 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 CAMK1Q14012 370 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 CC2D1AQ6P1N0 951 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 LILRA6Q6PI73 481 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 BEND5Q7L4P6 421 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TMC7Q7Z402 723 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 BNIPLQ7Z465 357 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TCEAL8Q8IYN2 117 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 DEFB106AQ8N104 65 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 POF1BQ8WVV4 589 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 CENPIQ92674 756 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 KRT35Q92764 455 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 NT5C3BQ969T7 300 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 OSBPL9Q96SU4 736 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 SEPT5Q99719 369 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TLR9Q9NR96 1032 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 CDC23Q9UJX2 597 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 SCML2Q9UQR0 700 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 PCDHA3Q9Y5H8 950 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 CHD7Q9P2D1 2997 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 TRANK1O15050 2925 aa15.44■□□□□ 0.06
SHKBP1-211ENST00000595945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 CCDC66A2RUB6 948 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 C2orf71A6NGG8 1288 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 CES2O00748 559 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 GRM6O15303 877 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 PSTPIP1O43586 416 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 LRCH4O75427 683 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 ENDOD1O94919 500 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 RTN3O95197 1032 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 LTFP02788 710 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 PCK1P35558 622 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 MATKP42679 507 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 USP46P62068 366 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 SMC1AQ14683 1233 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 RAB30Q15771 203 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 LRRC38Q5VT99 294 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 OTUD1Q5VV17 481 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 DAB2IPQ5VWQ8 1189 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 SCD5Q86SK9 330 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 MRPL43Q8N983 215 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 STKLD1Q8NE28 680 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 ALG3Q92685 438 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 TCF25Q9BQ70 676 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 TTLL2Q9BWV7 592 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 FBXO44Q9H4M3 255 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 POPDC2Q9HBU9 364 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 YIPF1Q9Y548 306 aa15.43■□□□□ 0.06
SHKBP1-211ENST00000595945 SLC38A8A6NNN8 435 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 HIDE1A8MVS5 230 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 H3BNC9 293 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 SRGAP2O75044 1071 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 C1RP00736 705 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 TCF4P15884 667 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 SDC4P31431 198 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 NOS2P35228 1153 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 SLC25A11Q02978 314 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 C15orf59Q2T9L4 293 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 SH3PXD2AQ5TCZ1 1133 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 DCAF12L1Q5VU92 463 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 DENND5BQ6ZUT9 1274 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 RHOT1Q8IXI2 618 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 UBL4BQ8N7F7 174 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 COG1Q8WTW3 980 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 FAM149B1Q96BN6 582 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 PBKQ96KB5 322 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 CFAP57Q96MR6 1250 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 NPY6RQ99463 290 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 EMILIN2Q9BXX0 1053 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 ADAM33Q9BZ11 813 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 CARD9Q9H257 536 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 NKX2-4Q9H2Z4 354 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 PRO3102Q9H379 93 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 NGRNQ9NPE2 291 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 ENTPD7Q9NQZ7 604 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 MSRAQ9UJ68 235 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 MTUS1Q9ULD2 1270 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 USTQ9Y2C2 406 aa15.42■□□□□ 0.06
SHKBP1-211ENST00000595945 LAMA2P24043 3122 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 KCNK3O14649 394 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 TGM5O43548 720 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 ADH1AP07327 375 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 ZDHHC11BP0C7U3 371 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 TFE3P19532 575 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 MIPP30301 263 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 PGFP49763 221 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 YWHAGP61981 247 aaKnown RBP eCLIP15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 GPM6BQ13491 265 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 WHAMMP3Q1A5X7 153 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 SLC25A52Q3SY17 297 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 RAB6CQ53S08 254 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 SYPL2Q5VXT5 272 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 PLPP4Q5VZY2 271 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 PDE12Q6L8Q7 609 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 CYP4V2Q6ZWL3 525 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 STRADAQ7RTN6 431 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms