RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 GSNP06396 782 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 GARTP22102 1010 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 DHX34Q14147 1143 aaKnown RBP18.82■□□□□ 0.6
SYNM-204ENST00000594047 EXD1Q8NHP7 514 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 THTPAQ9BU02 230 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 ZNF229Q9UJW7 825 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 CALCAP01258 141 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 ALDH5A1P51649 535 aaPredicted RBP18.82■□□□□ 0.6
SYNM-204ENST00000594047 UGP2Q16851 508 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 GET4Q7L5D6 327 aaPredicted RBP18.82■□□□□ 0.6
SYNM-204ENST00000594047 LUZP2Q86TE4 346 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 MRPL17Q9NRX2 175 aaKnown RBP18.82■□□□□ 0.6
SYNM-204ENST00000594047 EVPLLA8MZ36 301 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 TBC1D4O60343 1298 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 CES3Q6UWW8 571 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
SYNM-204ENST00000594047 SPATA4Q8NEY3 305 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 HELQQ8TDG4 1101 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 UBXN6Q9BZV1 441 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 PDGFCQ9NRA1 345 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 MGAT4DA6NG13 374 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 ANXA9O76027 345 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 AMD1P17707 334 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 CYP11B2P19099 503 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 POLR2EP19388 210 aaKnown RBP18.82■□□□□ 0.6
SYNM-204ENST00000594047 MAGEA4P43358 317 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 GSSP48637 474 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 FBXO47Q5MNV8 452 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 TEDDM1Q5T9Z0 273 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
SYNM-204ENST00000594047 CSHL1Q14406 222 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 NLRP14Q86W24 1093 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 TFE3P19532 575 aaPredicted RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 NCKAP1LP55160 1127 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 PRPF39Q86UA1 669 aaKnown RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 GPC2Q8N158 579 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 BBS2Q9BXC9 721 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 IL1RAPL1Q9NZN1 696 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 PSMC3IPQ9P2W1 217 aaPredicted RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 UVRAGQ9P2Y5 699 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 ZMYM5Q9UJ78 669 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 SHOC2Q9UQ13 582 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 LRRC7Q96NW7 1537 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 SLURP2P0DP57 97 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 LHX1P48742 406 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 XRCC4Q13426 336 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 SCUBE3Q8IX30 993 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 SYTL5Q8TDW5 730 aaPredicted RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 STAMBPL1Q96FJ0 436 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 ZNHIT2Q9UHR6 403 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 AP4E1Q9UPM8 1137 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 RABL6Q3YEC7 729 aaPredicted RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 LONP2Q86WA8 852 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 GAD1Q99259 594 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 PRR23D1E9PI22 279 aaPredicted RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 SCAMP1O15126 338 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 FYNP06241 537 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 PRR23D2P0DMB1 279 aaPredicted RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 FEN1P39748 380 aaKnown RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 SCNN1GP51170 649 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 LAMB3Q13751 1172 aa18.81■□□□□ 0.6
SYNM-204ENST00000594047 PRPF18Q99633 342 aaKnown RBP18.81■□□□□ 0.6
SYNM-204ENST00000594047 O00370 1275 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 FOXN3O00409 490 aaPredicted RBP18.8■□□□□ 0.6
SYNM-204ENST00000594047 FKTNO75072 461 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 ITGALP20701 1170 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 NDST1P52848 882 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 HLA-DQA1Q5Y7H0 255 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 FGD2Q7Z6J4 655 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 ADCK1Q86TW2 530 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 CCDC60Q8IWA6 550 aaPredicted RBP18.8■□□□□ 0.6
SYNM-204ENST00000594047 COL26A1Q96A83 441 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 RTFDC1Q9BY42 306 aaPredicted RBP18.8■□□□□ 0.6
SYNM-204ENST00000594047 SLC9A8Q9Y2E8 581 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 WASP42768 502 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 TUBP50607 506 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 ZBTB45Q96K62 511 aaPredicted RBP18.8■□□□□ 0.6
SYNM-204ENST00000594047 SH3BP4Q9P0V3 963 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 VANGL2Q9ULK5 521 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 ALG6Q9Y672 507 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 AP3B1O00203 1094 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 FXR1P51114 621 aaKnown RBP eCLIP18.8■□□□□ 0.6
SYNM-204ENST00000594047 THOP1P52888 689 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 RCAN1P53805 252 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 BCAT1P54687 386 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 ACAD10Q6JQN1 1059 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 FBXL19Q6PCT2 694 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 TRIM69Q86WT6 500 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 TRAPPC5Q8IUR0 188 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 PLD3Q8IV08 490 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 CCSER1Q9C0I3 900 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 WWP1Q9H0M0 922 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 RBM12Q9NTZ6 932 aaKnown RBP18.8■□□□□ 0.6
SYNM-204ENST00000594047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
SYNM-204ENST00000594047 CCDC22O60826 627 aa18.8■□□□□ 0.6
SYNM-204ENST00000594047 GATAD2AQ86YP4 633 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms