RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SDCBP2Q9H190 292 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 GMIPQ9P107 970 aa18.54■□□□□ 0.56
RETREG3-212ENST00000593251 TBC1D3BA6NDS4 549 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 TNFRSF10BO14763 440 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 EXOC3O60645 756 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 PPP6R2O75170 966 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 TULP3O75386 442 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 CEACAM1P13688 526 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 CSRP1P21291 193 aaKnown RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 ATICP31939 592 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 WASP42768 502 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 PGFP49763 221 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 ORC1Q13415 861 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 BIRC3Q13489 604 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 ANO4Q32M45 955 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 ZNF699Q32M78 642 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 HSF5Q4G112 596 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 FOXD4L5Q5VV16 416 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 BTBD8Q5XKL5 378 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 TMEM25Q86YD3 366 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 ETFBKMTQ8IXQ9 262 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 FOXD4L4Q8WXT5 416 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 OVCA2Q8WZ82 227 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 NUSAP1Q9BXS6 441 aaKnown RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 FSCN3Q9NQT6 498 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 EVLQ9UI08 416 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-212ENST00000593251 WASF3Q9UPY6 502 aa18.53■□□□□ 0.56
RETREG3-212ENST00000593251 ATP8B3O60423 1300 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 POLR2DO15514 142 aaKnown RBP18.52■□□□□ 0.56
RETREG3-212ENST00000593251 CUTAO60888 179 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ENGP17813 658 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ITPKAP23677 461 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 SNRPFP62306 86 aaKnown RBP18.52■□□□□ 0.56
RETREG3-212ENST00000593251 FOXD4L6Q3SYB3 417 aaPredicted RBP18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ZNF667Q5HYK9 610 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 C10orf76Q5T2E6 689 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 FOXD4L3Q6VB84 417 aaPredicted RBP18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ACOT1Q86TX2 421 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ZNF513Q8N8E2 541 aaPredicted RBP18.52■□□□□ 0.56
RETREG3-212ENST00000593251 OTUB2Q96DC9 234 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 DMAP1Q9NPF5 467 aaPredicted RBP18.52■□□□□ 0.56
RETREG3-212ENST00000593251 SPHK2Q9NRA0 654 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 KRT82Q9NSB4 513 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 HCN2Q9UL51 889 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ZMIZ1Q9ULJ6 1067 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ZZEF1O43149 2961 aa18.52■□□□□ 0.56
RETREG3-212ENST00000593251 ASPMQ8IZT6 3477 aa18.52■□□□□ 0.55
RETREG3-212ENST00000593251 PCNX2A6NKB5 2137 aa18.52■□□□□ 0.55
RETREG3-212ENST00000593251 LRRIQ3A6PVS8 624 aaPredicted RBP18.51■□□□□ 0.55
RETREG3-212ENST00000593251 HOXC11O43248 304 aaPredicted RBP18.51■□□□□ 0.55
RETREG3-212ENST00000593251 AP1G2O75843 785 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 BEST1O76090 585 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 CCDC130P13994 396 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 AFMP43652 599 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 LMAN2Q12907 356 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 CUL4BQ13620 913 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 BMT2Q1RMZ1 405 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 SNX30Q5VWJ9 437 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 LYSMD4Q5XG99 296 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 KIAA1211LQ6NV74 962 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 MIB1Q86YT6 1006 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 C12orf56Q8IXR9 622 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 GRAMD1CQ8IYS0 662 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 FUKQ8N0W3 1084 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 SMARCD1Q96GM5 515 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 ZNF396Q96N95 335 aaPredicted RBP18.51■□□□□ 0.55
RETREG3-212ENST00000593251 SMOQ99835 787 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 SCNM1Q9BWG6 230 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 ADAM33Q9BZ11 813 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 NACA2Q9H009 215 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 IL37Q9NZH6 218 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 DEC1Q9P2X7 70 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 PCDH15Q96QU1 1955 aa18.51■□□□□ 0.55
RETREG3-212ENST00000593251 WDFY3Q8IZQ1 3526 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 VNN1O95497 513 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 YEATS4O95619 227 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 CFIP05156 583 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
RETREG3-212ENST00000593251 ZDHHC11BP0C7U3 371 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 HOXB2P14652 356 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 GABRG2P18507 467 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 NCOA4Q13772 614 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 BYSLQ13895 437 aaKnown RBP18.5■□□□□ 0.55
RETREG3-212ENST00000593251 KNOP1Q1ED39 458 aaKnown RBP18.5■□□□□ 0.55
RETREG3-212ENST00000593251 TERB1Q8NA31 727 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 PARD3BQ8TEW8 1205 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 TNIP3Q96KP6 325 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 TMEM121BQ9BXQ6 578 aaPredicted RBP18.5■□□□□ 0.55
RETREG3-212ENST00000593251 VRTNQ9H8Y1 702 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 CALCOCO1Q9P1Z2 691 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 HMGXB4Q9UGU5 601 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 PILRBQ9UKJ0 227 aa18.5■□□□□ 0.55
RETREG3-212ENST00000593251 TLR5O60602 858 aa18.49■□□□□ 0.55
RETREG3-212ENST00000593251 TBX18O95935 607 aa18.49■□□□□ 0.55
RETREG3-212ENST00000593251 C4BPAP04003 597 aaKnown RBP18.49■□□□□ 0.55
RETREG3-212ENST00000593251 TUBP50607 506 aa18.49■□□□□ 0.55
RETREG3-212ENST00000593251 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms