RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TMEM169Q96HH4 297 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 LRRC4Q9HBW1 653 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 PNPLA8Q9NP80 782 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 DMAP1Q9NPF5 467 aaPredicted RBP14.13□□□□□ -0.15
VMP1-217ENST00000593168 METTL5Q9NRN9 209 aaKnown RBP14.13□□□□□ -0.15
VMP1-217ENST00000593168 SPG21Q9NZD8 308 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 CLEC1BQ9P126 229 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 STK39Q9UEW8 545 aa14.13□□□□□ -0.15
VMP1-217ENST00000593168 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
VMP1-217ENST00000593168 CCDC66A2RUB6 948 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 TMEM221A6NGB7 291 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 HHLA1C9JL84 531 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 M0R296 226 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 SRGAP2O75044 1071 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 FBXO21O94952 628 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 SLU7O95391 586 aaKnown RBP14.12□□□□□ -0.15
VMP1-217ENST00000593168 SOD2P04179 222 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 LCP1P13796 627 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 CTNNA1P35221 906 aaKnown RBP14.12□□□□□ -0.15
VMP1-217ENST00000593168 PPM1AP35813 382 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 NDUFV1P49821 464 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 OGDHQ02218 1023 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 GPR17Q13304 367 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 SLC39A12Q504Y0 691 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 RAB41Q5JT25 222 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 EFHC1Q5JVL4 640 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 VSTM1Q6UX27 236 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 TRIM67Q6ZTA4 783 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 SLC26A9Q7LBE3 791 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 BMP8AQ7Z5Y6 402 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 CREG2Q8IUH2 290 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 GPR65Q8IYL9 337 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 SCML4Q8N228 414 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 CEP112Q8N8E3 955 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 C2orf15Q8WU43 125 aaKnown RBP14.12□□□□□ -0.15
VMP1-217ENST00000593168 PIK3R5Q8WYR1 880 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 KCNK16Q96T55 309 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 HERC2P3Q9BVR0 1158 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 PLVAPQ9BX97 442 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 VN1R3Q9BXE9 311 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 CARD9Q9H257 536 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 CNGB3Q9NQW8 809 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 PCDHB5Q9Y5E4 795 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 PCDHB12Q9Y5F1 795 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 PCDHA3Q9Y5H8 950 aa14.12□□□□□ -0.15
VMP1-217ENST00000593168 C2CD4BA6NLJ0 364 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 PIK3R2O00459 728 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 DPYSL4O14531 572 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 KCNK3O14649 394 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 SART1O43290 800 aaKnown RBP14.11□□□□□ -0.15
VMP1-217ENST00000593168 GLI1P08151 1106 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 OR4Q2P0C623 313 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 PSMA2P25787 234 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 MAGEA11P43364 429 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 PEX5P50542 639 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 ZNF143P52747 638 aaPredicted RBP14.11□□□□□ -0.15
VMP1-217ENST00000593168 CACNA2D1P54289 1103 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 CKAP4Q07065 602 aaKnown RBP14.11□□□□□ -0.15
VMP1-217ENST00000593168 ADCY1Q08828 1119 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 ZNF252P-AS1Q0IIN9 211 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 ADIGQ0VDE8 80 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 KIAA1841Q6NSI8 718 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 CC2D1AQ6P1N0 951 aaPredicted RBP14.11□□□□□ -0.15
VMP1-217ENST00000593168 DDX53Q86TM3 631 aaKnown RBP14.11□□□□□ -0.15
VMP1-217ENST00000593168 SIX6OS1Q8N1H7 587 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 MYRIPQ8NFW9 859 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 SPPL3Q8TCT6 385 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 COG1Q8WTW3 980 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 RXFP2Q8WXD0 754 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 PBXIP1Q96AQ6 731 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 B3GALT6Q96L58 329 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 CARD6Q9BX69 1037 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 TMEM30AQ9NV96 361 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 MTRRQ9UBK8 725 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.11□□□□□ -0.15
VMP1-217ENST00000593168 PTPRDP23468 1912 aa14.11□□□□□ -0.15
VMP1-217ENST00000593168 ZNF185O15231 689 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 GLP2RO95838 553 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 GPD1P21695 349 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 CXCR5P32302 372 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 PAFAH1B1P43034 410 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 NRIP1P48552 1158 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 GLUD2P49448 558 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 TKTL1P51854 596 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 PTPN5P54829 565 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 RWDD2BP57060 319 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 ZXDAP98168 799 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 DSG1Q02413 1049 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 TCF15Q12870 199 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 PSMD5Q16401 504 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 LRRC38Q5VT99 294 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 SLC8B1Q6J4K2 584 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 CPNE8Q86YQ8 564 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 RHOT1Q8IXI2 618 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 RASGEF1CQ8N431 466 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 EMC1Q8N766 993 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 EFHBQ8N7U6 833 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 KLHL23Q8NBE8 558 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms