RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RAPGEF1Q13905 1077 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 SYCP1Q15431 976 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 PTPN21Q16825 1174 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 SOWAHAQ2M3V2 549 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 FILIP1LQ4L180 1135 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 MDH1BQ5I0G3 518 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 GJB7Q6PEY0 223 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 ELMSAN1Q6PJG2 1045 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 RSPO2Q6UXX9 243 aaPredicted RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 SPATA31D4Q6ZUB0 917 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 RRAGAQ7L523 313 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 VN1R2Q8NFZ6 395 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 LNX1Q8TBB1 728 aaPredicted RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 KAT5Q92993 513 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 MYLPFQ96A32 169 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 KLHL5Q96PQ7 755 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 SEPT5Q99719 369 aaPredicted RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 MED10Q9BTT4 135 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 APOL5Q9BWW9 433 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 MUC3BQ9H195 1237 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 HSD3B7Q9H2F3 369 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 DPEP3Q9H4B8 488 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 FAM207AQ9NSI2 230 aaPredicted RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 FAM49BQ9NUQ9 324 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 LMCD1Q9NZU5 365 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 APEX2Q9UBZ4 518 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 LIMA1Q9UHB6 759 aaKnown RBP6.81□□□□□ -1.32
VPS4B-205ENST00000591383 HCFC2Q9Y5Z7 792 aa6.81□□□□□ -1.32
VPS4B-205ENST00000591383 ATP8B3O60423 1300 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 FAM221AA4D161 298 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 GTPBP10A4D1E9 387 aaKnown RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 XIRP2A4UGR9 3374 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 FAM221BA6H8Z2 402 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SMAD7O15105 426 aaKnown RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 AXIN1O15169 862 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 TGM5O43548 720 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 TBX10O75333 385 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 TACC1O75410 805 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SOAT2O75908 522 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 OAZ2O95190 189 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 GLP2RO95838 553 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 TPM3P06753 285 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 C8AP07357 584 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CCDC130P13994 396 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CD19P15391 556 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SLC9A1P19634 815 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 KCNA5P22460 613 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 ELF1P32519 619 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 USP8P40818 1118 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 LHX1P48742 406 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CLCN4P51793 760 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 NDST1P52848 882 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 ARHGAP44Q17R89 818 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 MGAT5BQ3V5L5 792 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 RARS2Q5T160 578 aaKnown RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 HFE2Q6ZVN8 426 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 DENND4AQ7Z401 1863 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 ACOT1Q86TX2 421 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 PPFIBP1Q86W92 1011 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SPATA2LQ8IUW3 424 aaPredicted RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 DCP1BQ8IZD4 617 aaKnown RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 TTC9BQ8N6N2 239 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 EFHBQ8N7U6 833 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 RBBP8NLQ8NC74 664 aaPredicted RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 B3GALNT2Q8NCR0 500 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SLC7A14Q8TBB6 771 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SPATA18Q8TC71 538 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 GATAD2BQ8WXI9 593 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CASP10Q92851 521 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 JAKMIP2Q96AA8 810 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 TNIP3Q96KP6 325 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 DEPDC7Q96QD5 511 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CDCA3Q99618 268 aaPredicted RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 RTP3Q9BQQ7 232 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CLSTN3Q9BQT9 956 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 RHOBTB2Q9BYZ6 727 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 DNAI2Q9GZS0 605 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SFXN1Q9H9B4 322 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CYP3A43Q9HB55 503 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CYP4F11Q9HBI6 524 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 RXFP1Q9HBX9 757 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 KRT82Q9NSB4 513 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 CISHQ9NSE2 258 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 IFNKQ9P0W0 207 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 FNIP2Q9P278 1114 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 FBXW11Q9UKB1 542 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 AJAP1Q9UKB5 411 aaPredicted RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 ATXN7L1Q9ULK2 861 aaPredicted RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 COQ4Q9Y3A0 265 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 YIPF1Q9Y548 306 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 PCDHB4Q9Y5E5 795 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 FHOD1Q9Y613 1164 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 IRAK3Q9Y616 596 aa6.8□□□□□ -1.32
VPS4B-205ENST00000591383 SPTBN5Q9NRC6 3674 aaKnown RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 MTCL1Q9Y4B5 1905 aaKnown RBP6.8□□□□□ -1.32
VPS4B-205ENST00000591383 MTMR11A4FU01 709 aa6.79□□□□□ -1.32
VPS4B-205ENST00000591383 H3BQ06 376 aaPredicted RBP6.79□□□□□ -1.32
VPS4B-205ENST00000591383 PMM2O15305 246 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms