RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 OBP2AQ9NY56 170 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 EHD2Q9NZN4 543 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 CFAP97Q9P2B7 532 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 CYTH4Q9UIA0 394 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 ARHGAP26Q9UNA1 814 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 SIK3Q9Y2K2 1263 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 VPS13AQ96RL7 3174 aa12.14□□□□□ -0.47
VMP1-211ENST00000591315 SOBPA7XYQ1 873 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 XPO1O14980 1071 aaKnown RBP12.13□□□□□ -0.47
VMP1-211ENST00000591315 TEX33O43247 280 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 TLR5O60602 858 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 IRF1P10914 325 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 LCP1P13796 627 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 TARSP26639 723 aaKnown RBP12.13□□□□□ -0.47
VMP1-211ENST00000591315 CLCN1P35523 988 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 PPP3CCP48454 512 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 STARD6P59095 220 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 PFKPQ01813 784 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 ADIGQ0VDE8 80 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 RAPGEF1Q13905 1077 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 DRAP1Q14919 205 aaPredicted RBP12.13□□□□□ -0.47
VMP1-211ENST00000591315 ARHGAP29Q52LW3 1261 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 RAB41Q5JT25 222 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
VMP1-211ENST00000591315 PDZD8Q8NEN9 1154 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 CLEC4CQ8WTT0 213 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 SLC35F5Q8WV83 523 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 OVCA2Q8WZ82 227 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 IRF7Q92985 503 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 CHFRQ96EP1 664 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 DDX23Q9BUQ8 820 aaKnown RBP12.13□□□□□ -0.47
VMP1-211ENST00000591315 NAA15Q9BXJ9 866 aaKnown RBP12.13□□□□□ -0.47
VMP1-211ENST00000591315 UBXN6Q9BZV1 441 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 DNAI2Q9GZS0 605 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 GANQ9H2C0 597 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 TJP2Q9UDY2 1190 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 ZMYM5Q9UJ78 669 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 NAGPAQ9UK23 515 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 PIAS3Q9Y6X2 628 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 MIA3Q5JRA6 1907 aa12.13□□□□□ -0.47
VMP1-211ENST00000591315 LGALS16A8MUM7 142 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 THAP12O43422 761 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 RARGP13631 454 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 UCHL3P15374 230 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 AOC1P19801 751 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 CDK11BP21127 795 aaKnown RBP12.12□□□□□ -0.47
VMP1-211ENST00000591315 GNA15P30679 374 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 ZNF165P49910 485 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 UBXN2BQ14CS0 331 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 SYCP1Q15431 976 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 NFKBIBQ15653 356 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 ENOSF1Q7L5Y1 443 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 CCDC186Q7Z3E2 898 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 PASD1Q8IV76 773 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 WDTC1Q8N5D0 677 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 CSGALNACT1Q8TDX6 532 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 DNASE1L2Q92874 299 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 BPIFA3Q9BQP9 254 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 LRRC4Q9HBW1 653 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
VMP1-211ENST00000591315 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
VMP1-211ENST00000591315 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
VMP1-211ENST00000591315 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
VMP1-211ENST00000591315 DUS2Q9NX74 493 aaKnown RBP12.12□□□□□ -0.47
VMP1-211ENST00000591315 NDRG2Q9UN36 371 aaKnown RBP12.12□□□□□ -0.47
VMP1-211ENST00000591315 KANSL1LA0AUZ9 987 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 LRRC10BA6NIK2 292 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 FAM170BA6NMN3 283 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 YJEFN3A6XGL0 299 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 E7ENQ6 273 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 ZBED1O96006 694 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 RFX1P22670 979 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 GPD2P43304 727 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 CLCN5P51795 746 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 KPNA1P52294 538 aaPredicted RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 POLR2FP61218 127 aaKnown RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
VMP1-211ENST00000591315 UBXN1Q04323 297 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 PRKCQQ04759 706 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 FZD5Q13467 585 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 RUNX3Q13761 415 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 EML3Q32P44 896 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 PM20D1Q6GTS8 502 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 CCDC105Q8IYK2 499 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 FAM71AQ8IYT1 594 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 EDEM1Q92611 657 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms