RNA–Protein interactions for RNA: ENST00000590509.5

PTPRS-208, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best) BASIC

Gene PTPRS, Length 893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-208ENST00000590509 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
PTPRS-208ENST00000590509 AK8Q96MA6 479 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 KCNK16Q96T55 309 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 SPHK2Q9NRA0 654 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 INTS13Q9NVM9 706 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 ASXL3Q9C0F0 2248 aa17.04■□□□□ 0.32
PTPRS-208ENST00000590509 URB1O60287 2271 aaKnown RBP17.03■□□□□ 0.32
PTPRS-208ENST00000590509 E2F8A0AVK6 867 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 FAM149AA5PLN7 773 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 C1QL1O75973 258 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 SYPP08247 313 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 ATXN1LP0C7T5 689 aaKnown RBP17.03■□□□□ 0.32
PTPRS-208ENST00000590509 ANXA13P27216 316 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 SLC14A1Q13336 389 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 ANO4Q32M45 955 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 HS2ST1Q7LGA3 356 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 KIAA1958Q8N8K9 716 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 BAHD1Q8TBE0 780 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-208ENST00000590509 ELMO3Q96BJ8 720 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 HVCN1Q96D96 273 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 MRPL44Q9H9J2 332 aaKnown RBP17.03■□□□□ 0.32
PTPRS-208ENST00000590509 CACNA2D2Q9NY47 1150 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 DEC1Q9P2X7 70 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 FNDC3AQ9Y2H6 1198 aaKnown RBP17.03■□□□□ 0.32
PTPRS-208ENST00000590509 STARD13Q9Y3M8 1113 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 TMEM131Q92545 1883 aa17.03■□□□□ 0.32
PTPRS-208ENST00000590509 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.02■□□□□ 0.32
PTPRS-208ENST00000590509 KCNJ18B7U540 433 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 TRIM66O15016 1216 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.32
PTPRS-208ENST00000590509 DKK1O94907 266 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 GCNT3O95395 438 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 CYP4F3Q08477 520 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 CAMK2BQ13554 666 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 HNRNPDQ14103 355 aaKnown RBP17.02■□□□□ 0.32
PTPRS-208ENST00000590509 TDRD10Q5VZ19 366 aaKnown RBP17.02■□□□□ 0.32
PTPRS-208ENST00000590509 PAQR9Q6ZVX9 377 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 DPH6Q7L8W6 267 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 GLRX5Q86SX6 157 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.32
PTPRS-208ENST00000590509 ACCSQ96QU6 501 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 GABRG3Q99928 467 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 TBC1D14Q9P2M4 693 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 BTBD3Q9Y2F9 522 aa17.02■□□□□ 0.32
PTPRS-208ENST00000590509 SHROOM3Q8TF72 1996 aa17.02■□□□□ 0.31
PTPRS-208ENST00000590509 SLC26A4O43511 780 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
PTPRS-208ENST00000590509 GARTP22102 1010 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 TMPRSS7Q7RTY8 843 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 CHPFQ8IZ52 775 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
PTPRS-208ENST00000590509 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 MMS19Q96T76 1030 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 SCUBE2Q9NQ36 999 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 DNAJC17Q9NVM6 304 aaKnown RBP17.01■□□□□ 0.31
PTPRS-208ENST00000590509 GMIPQ9P107 970 aa17.01■□□□□ 0.31
PTPRS-208ENST00000590509 TRABD2BA6NFA1 517 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 GOLGA8CPA6NN73 597 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 TBX18O95935 607 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 YWHAQP27348 245 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 HOXD13P35453 343 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 PPP3CCP48454 512 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 KIAA1324Q6UXG2 1013 aaKnown RBP17■□□□□ 0.31
PTPRS-208ENST00000590509 RABEPKQ7Z6M1 372 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 NUP93Q8N1F7 819 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 KCNV2Q8TDN2 545 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 SETD7Q8WTS6 366 aaKnown RBP17■□□□□ 0.31
PTPRS-208ENST00000590509 DNASE2BQ8WZ79 361 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 HPS3Q969F9 1004 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 CEP295NLQ96MC4 621 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 SLITRK1Q96PX8 696 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
PTPRS-208ENST00000590509 PRDM16Q9HAZ2 1276 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 WSB2Q9NYS7 404 aaPredicted RBP17■□□□□ 0.31
PTPRS-208ENST00000590509 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
PTPRS-208ENST00000590509 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
PTPRS-208ENST00000590509 NEDD8-MDP1E9PL57 170 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 CILPO75339 1184 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 ZNF217O75362 1048 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 LDHAP00338 332 aaKnown RBP16.99■□□□□ 0.31
PTPRS-208ENST00000590509 CISD3P0C7P0 127 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 ABCD1P33897 745 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 GNL1P36915 607 aaPredicted RBP16.99■□□□□ 0.31
PTPRS-208ENST00000590509 CLDN6P56747 220 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 BTBD8Q5XKL5 378 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 GRAMD4Q6IC98 578 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 TPGS1Q6ZTW0 290 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 TRMT11Q7Z4G4 463 aaKnown RBP16.99■□□□□ 0.31
PTPRS-208ENST00000590509 DDX42Q86XP3 938 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPRS-208ENST00000590509 GPD1LQ8N335 351 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 ZMIZ2Q8NF64 920 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 RASSF8Q8NHQ8 419 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 BHMTQ93088 406 aa16.99■□□□□ 0.31
PTPRS-208ENST00000590509 TOE1Q96GM8 510 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms