RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NMUR1Q9HB89 426 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 LRRC4Q9HBW1 653 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 FBRSL1Q9HCM7 1045 aaKnown RBP12.73□□□□□ -0.37
TPM4-212ENST00000590180 UBE2TQ9NPD8 197 aaPredicted RBP12.73□□□□□ -0.37
TPM4-212ENST00000590180 TBC1D14Q9P2M4 693 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 NAGPAQ9UK23 515 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 NUDT5Q9UKK9 219 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 TSPAN16Q9UKR8 245 aa12.73□□□□□ -0.37
TPM4-212ENST00000590180 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 E2F8A0AVK6 867 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 PROB1E7EW31 1015 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 RNF225M0QZC1 329 aaPredicted RBP12.72□□□□□ -0.37
TPM4-212ENST00000590180 GFRA3O60609 400 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 PAEPP09466 180 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 ERCC5P28715 1186 aaPredicted RBP12.72□□□□□ -0.37
TPM4-212ENST00000590180 CCR3P51677 355 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 PDE4CQ08493 712 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 GAS6Q14393 721 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 PPP2R5DQ14738 602 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 DPCR1Q3MIW9 517 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 TMEM196Q5HYL7 178 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 C10orf120Q5SQS8 335 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 FSTL4Q6MZW2 842 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
TPM4-212ENST00000590180 Q6ZS52 159 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 SCD5Q86SK9 330 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 TTC30AQ86WT1 665 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 SPEM1Q8N4L4 309 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 UBR7Q8N806 425 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 GPT2Q8TD30 523 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 CD101Q93033 1021 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 CHFRQ96EP1 664 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 OSER1Q9NX31 292 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 OBSL1O75147 1896 aa12.72□□□□□ -0.37
TPM4-212ENST00000590180 ATG2BQ96BY7 2078 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 TULP2O00295 520 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 MDM4O15151 490 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 EGFP01133 1207 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 CALCAP01258 141 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 KRT5P13647 590 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 SLC9A1P19634 815 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 DRD1P21728 446 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 USP8P40818 1118 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 PLA2G4AP47712 749 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 PSEN1P49768 467 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 TKTL1P51854 596 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 BCAT1P54687 386 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 SATB1Q01826 763 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 GCNT1Q02742 428 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 GOLGA8FQ08AF8 430 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 GOLGA8DPQ0D2H9 430 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
TPM4-212ENST00000590180 CCINQ13939 588 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 DHCR24Q15392 516 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 CNGA2Q16280 664 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 HSP90AA4PQ58FG1 418 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 NAIF1Q69YI7 327 aaPredicted RBP12.71□□□□□ -0.37
TPM4-212ENST00000590180 RHBDF2Q6PJF5 856 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 GBP6Q6ZN66 633 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 IRF2BP1Q8IU81 584 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 ARHGAP18Q8N392 663 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
TPM4-212ENST00000590180 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
TPM4-212ENST00000590180 KLF16Q9BXK1 252 aaPredicted RBP12.71□□□□□ -0.37
TPM4-212ENST00000590180 THAP9Q9H5L6 903 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 CYLDQ9NQC7 956 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM4-212ENST00000590180 DNMT3LQ9UJW3 386 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
TPM4-212ENST00000590180 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 O00370 1275 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 XPO1O14980 1071 aaKnown RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 ZBED1O96006 694 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 ADH1CP00326 375 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 LCP1P13796 627 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 SLC6A11P48066 632 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 RGS7P49802 495 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 MFAP3P55082 362 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 LCLAT1Q6UWP7 414 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 ASCL5Q7RTU5 278 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 MIB1Q86YT6 1006 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 WBP2Q969T9 261 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 ZFRQ96KR1 1074 aaKnown RBP12.7□□□□□ -0.38
TPM4-212ENST00000590180 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
TPM4-212ENST00000590180 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms