RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 FAM171BQ6P995 826 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ARCQ7LC44 396 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 TADA2BQ86TJ2 420 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ACOT1Q86TX2 421 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 NOP9Q86U38 636 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ALYREFQ86V81 257 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF280BQ86YH2 543 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 SPATA2LQ8IUW3 424 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 SLC39A11Q8N1S5 342 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 COLGALT1Q8NBJ5 622 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ELOA3Q8NG57 546 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 PIK3R5Q8WYR1 880 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 RFFLQ8WZ73 363 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 DDX1Q92499 740 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 SECISBP2LQ93073 1101 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 C18orf8Q96DM3 657 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 CHP1Q99653 195 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 MED10Q9BTT4 135 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 HERC2P3Q9BVR0 1158 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 DUSP16Q9BY84 665 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 UBE2OQ9C0C9 1292 aaKnown RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 LMAN2LQ9H0V9 348 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 FBXO44Q9H4M3 255 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 ADAM22Q9P0K1 906 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 FNIP2Q9P278 1114 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 POLIQ9UNA4 740 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 PRG3Q9Y2Y8 225 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 PAXBP1Q9Y5B6 917 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 PCDHB5Q9Y5E4 795 aa7.72□□□□□ -1.17
SMAD4-210ENST00000590061 FNDC1Q4ZHG4 1894 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-210ENST00000590061 A0A087X0T9 212 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 C5orf67F2Z3F1 127 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 M0QYV0 167 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 MYO1FO00160 1098 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 DDX3XO00571 662 aaKnown RBP eCLIP7.71□□□□□ -1.182e-13■□□□□ 10.8
SMAD4-210ENST00000590061 XPO1O14980 1071 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 RTN3O95197 1032 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 PDGFRBP09619 1106 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 FAM228BP0C875 321 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 UNGP13051 313 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 NPR3P17342 541 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 MMP8P22894 467 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ITGB8P26012 769 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ELF1P32519 619 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 BMPR1AP36894 532 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 CETN2P41208 172 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SLC1A1P43005 524 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 CDH8P55286 799 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 GSCP56915 257 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 FMO1Q01740 532 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 DSG1Q02413 1049 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 GFPT1Q06210 699 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SPEM2Q0P670 501 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 GPR17Q13304 367 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SMC1AQ14683 1233 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 PAN2Q504Q3 1202 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF394Q53GI3 561 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 EFHC1Q5JVL4 640 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 RAD9BQ6WBX8 426 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 C16orf59Q7L2K0 433 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 BEND5Q7L4P6 421 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SIX6OS1Q8N1H7 587 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SCML4Q8N228 414 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 KIF18AQ8NI77 898 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 KBTBD7Q8WVZ9 684 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 KCTD13Q8WZ19 329 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 IRGQQ8WZA9 623 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 KAT5Q92993 513 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 PPP1R13BQ96KQ4 1090 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 TGS1Q96RS0 853 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 CDK5RAP1Q96SZ6 601 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SPOCK3Q9BQ16 436 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 MRPL45Q9BRJ2 306 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SYT11Q9BT88 431 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 OSBPL7Q9BZF2 842 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ZCWPW1Q9H0M4 648 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 KCNF1Q9H3M0 494 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 CWH43Q9H720 699 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 RC3H2Q9HBD1 1191 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 GOLGA2P5Q9HBQ8 144 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 LRRC4Q9HBW1 653 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 DMAP1Q9NPF5 467 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.183e-9■■■■■ 48.4
SMAD4-210ENST00000590061 CHST7Q9NS84 486 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 SPTLC3Q9NUV7 552 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ASNSD1Q9NWL6 643 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 DMGDHQ9UI17 866 aaKnown RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ZMYM5Q9UJ78 669 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ZMYND8Q9ULU4 1186 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-210ENST00000590061 ASB3Q9Y575 518 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 IRAK3Q9Y616 596 aa7.71□□□□□ -1.18
SMAD4-210ENST00000590061 MIF4GDA9UHW6 222 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MTA2O94776 668 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MICAL2O94851 1124 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 FGF19O95750 216 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CYP1A2P05177 515 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MMEP08473 750 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms