RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 ADAM17P78536 824 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 ZNF484Q5JVG2 852 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 ZNF569Q5MCW4 686 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 ARHGAP40Q5TG30 622 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 SYNE3Q6ZMZ3 975 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 TMTC3Q6ZXV5 915 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 LRRC8DQ7L1W4 858 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 KBTBD2Q8IY47 623 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 MBD6Q96DN6 1003 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 APOPT1Q96IL0 206 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 PNKPQ96T60 521 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 RMI1Q9H9A7 625 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 LIN7CQ9NUP9 197 aaKnown RBP8.52□□□□□ -1.05
VMP1-208ENST00000588617 TBC1D29Q9UFV1 150 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 VPS28Q9UK41 221 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 BAG5Q9UL15 447 aa8.52□□□□□ -1.05
VMP1-208ENST00000588617 RSF1Q96T23 1441 aaPredicted RBP8.52□□□□□ -1.05
VMP1-208ENST00000588617 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 GATMP50440 423 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 RPP30P78346 268 aaKnown RBP8.51□□□□□ -1.05
VMP1-208ENST00000588617 FHL3Q13643 280 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 CCNIQ14094 377 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 E2F2Q14209 437 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 NFIXQ14938 502 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 CERCAMQ5T4B2 595 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 DRICH1Q6PGQ1 229 aaPredicted RBP8.51□□□□□ -1.05
VMP1-208ENST00000588617 CLEC9AQ6UXN8 241 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.51□□□□□ -1.05
VMP1-208ENST00000588617 CPLX4Q7Z7G2 160 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 SLC15A3Q8IY34 581 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 GPR135Q8IZ08 494 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 FSTL5Q8N475 847 aaPredicted RBP8.51□□□□□ -1.05
VMP1-208ENST00000588617 KCNG4Q8TDN1 519 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 ADAMTS17Q8TE56 1095 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 KTI12Q96EK9 354 aaPredicted RBP8.51□□□□□ -1.05
VMP1-208ENST00000588617 MCRS1Q96EZ8 462 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 RBM17Q96I25 401 aaKnown RBP8.51□□□□□ -1.05
VMP1-208ENST00000588617 AP1M1Q9BXS5 423 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 CCDC134Q9H6E4 229 aa8.51□□□□□ -1.05
VMP1-208ENST00000588617 SAC3D1A6NKF1 404 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 B4GALT4O60513 344 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 CYP21A2P08686 494 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 AKR1B1P15121 316 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 UQCRC1P31930 480 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 RGS7BPQ6MZT1 257 aaPredicted RBP8.5□□□□□ -1.05
VMP1-208ENST00000588617 MSANTD2Q6P1R3 559 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 RASGRP2Q7LDG7 609 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 ANKRD23Q86SG2 305 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.5□□□□□ -1.05
VMP1-208ENST00000588617 ANKRD44Q8N8A2 993 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 SUN3Q8TAQ9 357 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 TMEM176AQ96HP8 235 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 DPYSL5Q9BPU6 564 aa8.5□□□□□ -1.05
VMP1-208ENST00000588617 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.5□□□□□ -1.05
VMP1-208ENST00000588617 ADM5C9JUS6 153 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 AGPSO00116 658 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 TOR1BO14657 336 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 KIAA0355O15063 1070 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 SEPT4O43236 478 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 PTP4A3O75365 173 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 URI1O94763 535 aaPredicted RBP8.49□□□□□ -1.05
VMP1-208ENST00000588617 TGM1P22735 817 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 RBL1P28749 1068 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 RNASE9P60153 205 aaKnown RBP8.49□□□□□ -1.05
VMP1-208ENST00000588617 CUL4AQ13619 759 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 EIF4A2Q14240 407 aaKnown RBP8.49□□□□□ -1.05
VMP1-208ENST00000588617 NFIL3Q16649 462 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 FAM69AQ5T7M9 428 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 NAA35Q5VZE5 725 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 H1FNTQ75WM6 255 aaPredicted RBP8.49□□□□□ -1.05
VMP1-208ENST00000588617 CARFQ8N187 725 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 FSIP1Q8NA03 581 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 LINS1Q8NG48 757 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 WDR24Q96S15 920 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 PLEKHA2Q9HB19 425 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 TMLHEQ9NVH6 421 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 CNOT7Q9UIV1 285 aaKnown RBP8.49□□□□□ -1.05
VMP1-208ENST00000588617 CAMK2AQ9UQM7 478 aa8.49□□□□□ -1.05
VMP1-208ENST00000588617 A0A1B0GTL3 188 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 CCDC78A2IDD5 438 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 SH3D21A4FU49 640 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 AP3D1O14617 1153 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 CDC14BO60729 498 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 HSPA1AP0DMV8 641 aaKnown RBP8.48□□□□□ -1.05
VMP1-208ENST00000588617 HSPA1BP0DMV9 641 aaKnown RBP8.48□□□□□ -1.05
VMP1-208ENST00000588617 GALNSP34059 522 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 HOXD13P35453 343 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 ACTN2P35609 894 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 GGT5P36269 586 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 MLANAQ16655 118 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 UBXN11Q5T124 520 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 SNX30Q5VWJ9 437 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 ATF7IPQ6VMQ6 1270 aa8.48□□□□□ -1.05
VMP1-208ENST00000588617 DIS3L2Q8IYB7 885 aaKnown RBP8.48□□□□□ -1.05
VMP1-208ENST00000588617 ELOA2Q8IYF1 753 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms