RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FGFBP2Q9BYJ0 223 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 CCDC86Q9H6F5 360 aaKnown RBP16.25■□□□□ 0.19
IFT20-216ENST00000588477 SPHK2Q9NRA0 654 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 STK17AQ9UEE5 414 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 CCDC39Q9UFE4 941 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
IFT20-216ENST00000588477 BPTFQ12830 3046 aa16.25■□□□□ 0.19
IFT20-216ENST00000588477 GCN1Q92616 2671 aaKnown RBP16.24■□□□□ 0.19
IFT20-216ENST00000588477 A0A1W2PQF6 199 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 ZBTB24O43167 697 aaPredicted RBP16.24■□□□□ 0.19
IFT20-216ENST00000588477 COCHO43405 550 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
IFT20-216ENST00000588477 BMP15O95972 392 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 IDEP14735 1019 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 NDUFV2P19404 249 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 YWHAQP27348 245 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 EGFLAMQ63HQ2 1017 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 TMEM25Q86YD3 366 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 NAXDQ8IW45 347 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 BBS7Q8IWZ6 715 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 NUP93Q8N1F7 819 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 OR6B3Q8NGW1 331 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 MDM1Q8TC05 714 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 FBXO32Q969P5 355 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 ACOX2Q99424 681 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 ZNF518BQ9C0D4 1074 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 DPEP3Q9H4B8 488 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 CD93Q9NPY3 652 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 OLFML3Q9NRN5 406 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 IGSF10Q6WRI0 2623 aa16.24■□□□□ 0.19
IFT20-216ENST00000588477 CLDN5O00501 218 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 HOXC11O43248 304 aaPredicted RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 NDUFS2O75306 463 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 IRF1P10914 325 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 PTPN1P18031 435 aaKnown RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 MAOBP27338 520 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 ALCAMQ13740 583 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 SURF1Q15526 300 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 CCNI2Q6ZMN8 369 aaPredicted RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 CHPFQ8IZ52 775 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 PDZD8Q8NEN9 1154 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 IPO4Q8TEX9 1081 aaKnown RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 WBP2Q969T9 261 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 ZNF419Q96HQ0 510 aaPredicted RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 ELOVL4Q9GZR5 314 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 FAM124BQ9H5Z6 455 aaPredicted RBP16.23■□□□□ 0.19
IFT20-216ENST00000588477 CCSER2Q9H7U1 834 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 STARD13Q9Y3M8 1113 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 CELSR3Q9NYQ7 3312 aa16.23■□□□□ 0.19
IFT20-216ENST00000588477 TP53BP1Q12888 1972 aaPredicted RBP16.22■□□□□ 0.19
IFT20-216ENST00000588477 ACACAQ13085 2346 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 TACC1O75410 805 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 RTN3O95197 1032 aaPredicted RBP16.22■□□□□ 0.19
IFT20-216ENST00000588477 GNSP15586 552 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 HECTD3Q5T447 861 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 RRAGBQ5VZM2 374 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 GRAMD4Q6IC98 578 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 TRAPPC11Q7Z392 1133 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 SLCO6A1Q86UG4 719 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 OVCA2Q8WZ82 227 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 KCNK16Q96T55 309 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 B3GNT5Q9BYG0 378 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 SLC6A17Q9H1V8 727 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 CD248Q9HCU0 757 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 PANK4Q9NVE7 773 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 SUSD2Q9UGT4 822 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 APOBEC2Q9Y235 224 aaKnown RBP16.22■□□□□ 0.19
IFT20-216ENST00000588477 RAD54BQ9Y620 910 aa16.22■□□□□ 0.19
IFT20-216ENST00000588477 KIAA0391O15091 583 aaKnown RBP16.21■□□□□ 0.19
IFT20-216ENST00000588477 GRIK2Q13002 908 aa16.21■□□□□ 0.19
IFT20-216ENST00000588477 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
IFT20-216ENST00000588477 TOGARAM2Q6ZUX3 1019 aa16.21■□□□□ 0.19
IFT20-216ENST00000588477 WDR49Q8IV35 697 aa16.21■□□□□ 0.19
IFT20-216ENST00000588477 SCAMP5Q8TAC9 235 aa16.21■□□□□ 0.19
IFT20-216ENST00000588477 DNAJC17Q9NVM6 304 aaKnown RBP16.21■□□□□ 0.19
IFT20-216ENST00000588477 GOLGA4Q13439 2230 aaKnown RBP16.21■□□□□ 0.18
IFT20-216ENST00000588477 URB1O60287 2271 aaKnown RBP16.2■□□□□ 0.18
IFT20-216ENST00000588477 SMG1Q96Q15 3661 aaKnown RBP16.2■□□□□ 0.18
IFT20-216ENST00000588477 A8MXQ7 604 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 PRRT4C9JH25 899 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 NEDD8-MDP1E9PL57 170 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 WDR72Q3MJ13 1102 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 WDR45BQ5MNZ6 344 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 SNX30Q5VWJ9 437 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 BRAPQ7Z569 592 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 RDH13Q8NBN7 331 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 B3GALNT2Q8NCR0 500 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 SCFD1Q8WVM8 642 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 FOXJ1Q92949 421 aa16.2■□□□□ 0.18
IFT20-216ENST00000588477 LRIG1Q96JA1 1093 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms