RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, human

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-210	ENST00000588458	KLRC4	O43908	158 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	VNN1	O95497	513 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	RPN1	P04843	607 aa	Known RBP	13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	IRF1	P10914	325 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	CCDC130	P13994	396 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	NDST1	P52848	882 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	DLG4	P78352	724 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	DNM1	Q05193	864 aa	Known RBP	13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	HSF5	Q4G112	596 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	DAB2IP	Q5VWQ8	1189 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	NUDT18	Q6ZVK8	323 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	BBS7	Q8IWZ6	715 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	FUK	Q8N0W3	1084 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	SLC2A14	Q8TDB8	520 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	HMGB4	Q8WW32	186 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	OTUB2	Q96DC9	234 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	KRT82	Q9NSB4	513 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	COMMD8	Q9NX08	183 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	IL37	Q9NZH6	218 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	DEC1	Q9P2X7	70 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	RCOR1	Q9UKL0	485 aa		13.62	□□□□□ -0.23
ABCA8-210	ENST00000588458	GREB1	Q4ZG55	1949 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	PATE3	B3GLJ2	98 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	BEST1	O76090	585 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	NR3C1	P04150	777 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	PML	P29590	882 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	KIR2DL1	P43626	348 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	NOVA1	P51513	510 aa	Known RBP	13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	MAP3K7CL	P57077	242 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	CLDN10	P78369	228 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	IRX4	P78413	519 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	PREPL	Q4J6C6	727 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	SNX30	Q5VWJ9	437 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	PSAPL1	Q6NUJ1	521 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	SV2A	Q7L0J3	742 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	LPCAT2	Q7L5N7	544 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	TMEM25	Q86YD3	366 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	SLC9A9	Q8IVB4	645 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	TMEFF1	Q8IYR6	380 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	C12orf29	Q8N999	325 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	KIAA0895	Q8NCT3	520 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	WHAMM	Q8TF30	809 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	WBP2	Q969T9	261 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	ZFR	Q96KR1	1074 aa	Known RBP	13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	SPACA7	Q96KW9	195 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	SMO	Q99835	787 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	FBXO44	Q9H4M3	255 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	SPHK2	Q9NRA0	654 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	FAM49B	Q9NUQ9	324 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	FRMD4B	Q9Y2L6	1034 aa		13.61	□□□□□ -0.23
ABCA8-210	ENST00000588458	MYOF	Q9NZM1	2061 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458		A0A1B0GVL5	298 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TCRBV21S2A2	A0A5A6	115 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	LNP1	A1A4G5	178 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	PDXK	O00764	312 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ACTN4	O43707	911 aa	Known RBP	13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TLR5	O60602	858 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ADAM23	O75077	832 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TULP3	O75386	442 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TBX18	O95935	607 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ZDHHC11B	P0C7U3	371 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TRIM21	P19474	475 aa	Known RBP	13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ADORA2B	P29275	332 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	PGF	P49763	221 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TUB	P50607	506 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	PKP1	Q13835	747 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	BYSL	Q13895	437 aa	Known RBP	13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	UAP1L1	Q3KQV9	507 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ZACN	Q401N2	412 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	SPOPL	Q6IQ16	392 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ARMCX6	Q7L4S7	300 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	UNC93A	Q86WB7	457 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	CRYBG2	Q8N1P7	616 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	FRMD1	Q8N878	549 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	ZMIZ2	Q8NF64	920 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	OLIG1	Q8TAK6	271 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TMC2	Q8TDI7	906 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	JAKMIP2	Q96AA8	810 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	KCTD10	Q9H3F6	313 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TMEM9B	Q9NQ34	198 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	TLR8	Q9NR97	1041 aa	Known RBP	13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	CHD8	Q9HCK8	2581 aa		13.6	□□□□□ -0.23
ABCA8-210	ENST00000588458	FAM92A	A1XBS5	289 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	GIPC1	O14908	333 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	IKBKB	O14920	756 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	TRIM24	O15164	1050 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	ZBTB24	O43167	697 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	HOXC11	O43248	304 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	CALU	O43852	315 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	HLA-DRA	P01903	254 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	FAM200B	P0CF97	657 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	CMA1	P23946	247 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	ATP5C1	P36542	298 aa	Known RBP	13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	P2RY2	P41231	377 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	PIK3CA	P42336	1068 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	WAS	P42768	502 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	C10orf76	Q5T2E6	689 aa		13.59	□□□□□ -0.23
ABCA8-210	ENST00000588458	SH3PXD2A	Q5TCZ1	1133 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms