RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 CNNM4Q6P4Q7 775 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 HS2ST1Q7LGA3 356 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 FAM35AQ86V20 835 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 DDX42Q86XP3 938 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TMEM25Q86YD3 366 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 SLC41A1Q8IVJ1 513 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 OR2I1PQ8NGU4 316 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 ZNF507Q8TCN5 953 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 OTUB2Q96DC9 234 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 SLITRK1Q96PX8 696 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 NUSAP1Q9BXS6 441 aaKnown RBP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 SMYD3Q9H7B4 428 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 TBC1D14Q9P2M4 693 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 MSRB2Q9Y3D2 182 aa14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 FASNP49327 2511 aaKnown RBP14.66□□□□□ -0.06
CLPTM1-208ENST00000588274 CEP192Q8TEP8 1941 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 CD59P13987 128 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 SYT1P21579 422 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 YWHAQP27348 245 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 TXLNAP40222 546 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 NASPP49321 788 aaPredicted RBP14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 MYL6P60660 151 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 WDR72Q3MJ13 1102 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 CCDC65Q8IXS2 484 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 NUP93Q8N1F7 819 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 PDILTQ8N807 584 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 ZNF513Q8N8E2 541 aaPredicted RBP14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 OR6B3Q8NGW1 331 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 SCFD1Q8WVM8 642 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 ACOX2Q99424 681 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 SDCBP2Q9H190 292 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 SNX25Q9H3E2 840 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 VRTNQ9H8Y1 702 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 KIAA1586Q9HCI6 787 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 STARD13Q9Y3M8 1113 aa14.65□□□□□ -0.06
CLPTM1-208ENST00000588274 BEST1O76090 585 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 ABL1P00519 1130 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 SERPINF2P08697 491 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 DLATP10515 647 aaKnown RBP14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 NDUFV2P19404 249 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 SIM1P81133 766 aaPredicted RBP14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 GAD2Q05329 585 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 RING1Q06587 406 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 IFRD2Q12894 506 aaPredicted RBP14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 C10orf76Q5T2E6 689 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 EGFLAMQ63HQ2 1017 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 FUKQ8N0W3 1084 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 NAT16Q8N8M0 369 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 KCNV2Q8TDN2 545 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 FBXO32Q969P5 355 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 ELMO3Q96BJ8 720 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 SPHK2Q9NRA0 654 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 GMIPQ9P107 970 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 BCCIPQ9P287 314 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 MTMR6Q9Y217 621 aa14.64□□□□□ -0.07
CLPTM1-208ENST00000588274 A8MXQ7 604 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 PRRT4C9JH25 899 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 AP5Z1O43299 807 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CACNG3O60359 315 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 RTN3O95197 1032 aaPredicted RBP14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 HOXB2P14652 356 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 DPP6P42658 865 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CASP4P49662 377 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CDH8P55286 799 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CLDN10P78369 228 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 RPL6Q02878 288 aaKnown RBP14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 ZNF33AQ06730 810 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 DUOXA1Q1HG43 343 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 BMT2Q1RMZ1 405 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 HECTD3Q5T447 861 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 RAB44Q7Z6P3 723 aaPredicted RBP14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 C12orf56Q8IXR9 622 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 MINDY1Q8N5J2 469 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 DEFB119Q8N690 84 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 RDH13Q8NBN7 331 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CCDC127Q96BQ5 260 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 SMOQ99835 787 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 GABRG3Q99928 467 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CSNK1G1Q9HCP0 422 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 DNAAF2Q9NVR5 837 aaKnown RBP14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 OSER1Q9NX31 292 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CHORDC1Q9UHD1 332 aaPredicted RBP14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 SLC6A14Q9UN76 642 aa14.63□□□□□ -0.07
CLPTM1-208ENST00000588274 TBC1D3BA6NDS4 549 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 CLIC2O15247 247 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 MAP3K13O43283 966 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 VNN1O95497 513 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 CFIP05156 583 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 TNNI1P19237 187 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 NTSR1P30989 418 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 WASP42768 502 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 TNNC1P63316 161 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 FAM26FQ5R3K3 315 aa14.62□□□□□ -0.07
CLPTM1-208ENST00000588274 TOGARAM2Q6ZUX3 1019 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms