RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 TRIM72Q6ZMU5 477 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 C1orf131Q8NDD1 294 aaKnown RBP12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 IRGQQ8WZA9 623 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 TRMT61BQ9BVS5 477 aaKnown RBP12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 EDEM3Q9BZQ6 932 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 LHX5Q9H2C1 402 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 CD320Q9NPF0 282 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 OLA1Q9NTK5 396 aaKnown RBP12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 CLIC5Q9NZA1 410 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 CHORDC1Q9UHD1 332 aaPredicted RBP12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 FBXL21Q9UKT6 434 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 ARHGAP26Q9UNA1 814 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 USP3Q9Y6I4 520 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 ANAPC1Q9H1A4 1944 aa12.48□□□□□ -0.41
SDHDP1-201ENST00000588055 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 LRRC53A6NM62 1247 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 NRG2O14511 850 aaPredicted RBP12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 ZNF263O14978 683 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 ZDHHC11BP0C7U3 371 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 VIPR2P41587 438 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 SLC7A9P82251 487 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 CDR2Q01850 454 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 GRM2Q14416 872 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 C10orf120Q5SQS8 335 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 PMF1Q6P1K2 205 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 NOP9Q86U38 636 aaKnown RBP12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 SCML4Q8N228 414 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 RNF139Q8WU17 664 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 IRF7Q92985 503 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 PPP1R13BQ96KQ4 1090 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 CCSER2Q9H7U1 834 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 CPQQ9Y646 472 aa12.47□□□□□ -0.41
SDHDP1-201ENST00000588055 E5RJQ4 531 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 PIK3R2O00459 728 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 COCHO43405 550 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 OLFM2O95897 454 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 RARGP13631 454 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 GDI1P31150 447 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 ATP5C1P36542 298 aaKnown RBP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 DAOAP59103 153 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 USP4Q13107 963 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 MTF1Q14872 753 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 TDRD12Q587J7 1177 aaKnown RBP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 PM20D1Q6GTS8 502 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 PPP1R2P3Q6NXS1 205 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 SARM1Q6SZW1 724 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 VITQ6UXI7 678 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 VPS36Q86VN1 386 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 ZDHHC17Q8IUH5 632 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 MFSD6LQ8IWD5 586 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 CSGALNACT1Q8TDX6 532 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 SH3RF2Q8TEC5 729 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 ABCC13Q9NSE7 274 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 DNMT3LQ9UJW3 386 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 LSM7Q9UK45 103 aaKnown RBP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 LUC7L2Q9Y383 392 aaKnown RBP12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 SH3BP1Q9Y3L3 701 aa12.46□□□□□ -0.41
SDHDP1-201ENST00000588055 DLL1O00548 723 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 CAPN9O14815 690 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 LTFP02788 710 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 MMEP08473 750 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 CFHP08603 1231 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 PBX1P40424 430 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 NSFP46459 744 aaKnown RBP12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 IFNAR2P48551 515 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 ZBED6P86452 979 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 ZXDAP98168 799 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 FCHO2Q0JRZ9 810 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 ZNF77Q15935 545 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 NAA35Q5VZE5 725 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 ERICH1Q86X53 443 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 SLC20A1Q8WUM9 679 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 BAP1Q92560 729 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 DNASE1L2Q92874 299 aa12.45□□□□□ -0.42
SDHDP1-201ENST00000588055 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms