RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 TUBA4AP68366 448 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 HOXA4Q00056 320 aaPredicted RBP5.2□□□□□ -1.58
VMP1-205ENST00000587470 PIN1Q13526 163 aaPredicted RBP5.2□□□□□ -1.58
VMP1-205ENST00000587470 TBC1D25Q3MII6 688 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 MTX3Q5HYI7 312 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 EPHA10Q5JZY3 1008 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 PRAMEF17Q5VTA0 474 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 ZNF425Q6IV72 752 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 DAAM2Q86T65 1068 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 JPH3Q8WXH2 748 aaPredicted RBP5.2□□□□□ -1.58
VMP1-205ENST00000587470 MESP1Q9BRJ9 268 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 FSD1LQ9BXM9 530 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 NMRK2Q9NPI5 230 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 ZNF180Q9UJW8 692 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 PRAG1Q86YV5 1406 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 CLSPNQ9HAW4 1339 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 IFT172Q9UG01 1749 aa5.2□□□□□ -1.58
VMP1-205ENST00000587470 LAMC1P11047 1609 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 TISP43B9A030 160 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 hCG_1984214I3L0E3 225 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 UBXN7O94888 489 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 ERBB2P04626 1255 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 PDGFRBP09619 1106 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 NPSP0C0P6 89 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 NHLRC4P0CG21 123 aaPredicted RBP5.19□□□□□ -1.58
VMP1-205ENST00000587470 ENGP17813 658 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 KELP23276 732 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 HTR1BP28222 390 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 MYO1EQ12965 1108 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 GTF2H3Q13889 308 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 GPR162Q16538 588 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 MTHFD1LQ6UB35 978 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 SLC35G2Q8TBE7 412 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 XAGE5Q8WWM1 108 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 R3HDM4Q96D70 268 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 P2RX7Q99572 595 aaKnown RBP5.19□□□□□ -1.58
VMP1-205ENST00000587470 DDX56Q9NY93 547 aaKnown RBP5.19□□□□□ -1.58
VMP1-205ENST00000587470 GABBR1Q9UBS5 961 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 ADAMTS5Q9UNA0 930 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 MRPS17Q9Y2R5 130 aaKnown RBP5.19□□□□□ -1.58
VMP1-205ENST00000587470 NPHP3Q7Z494 1330 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 C1orf167Q5SNV9 1468 aa5.19□□□□□ -1.58
VMP1-205ENST00000587470 LRPPRCP42704 1394 aaKnown RBP5.18□□□□□ -1.58
VMP1-205ENST00000587470 ADGRB2O60241 1585 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 TECPR2O15040 1411 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 ADGRL3Q9HAR2 1447 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
VMP1-205ENST00000587470 PRRT4C9JH25 899 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 SMIM22K7EJ46 135 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 MYO1FO00160 1098 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 AKAP10O43572 662 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 TJP3O95049 919 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 DLDP09622 509 aaKnown RBP5.18□□□□□ -1.58
VMP1-205ENST00000587470 RAB27AP51159 221 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 PDE6CP51160 858 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 ARFIP2P53365 341 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 IGBP1P78318 339 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 CYP4F2P78329 520 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 MGAT5BQ3V5L5 792 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 LMBRD2Q68DH5 695 aaPredicted RBP5.18□□□□□ -1.58
VMP1-205ENST00000587470 NAPRTQ6XQN6 538 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 ZNF66Q6ZN08 573 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 Q6ZWC4 215 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 NEK8Q86SG6 692 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 ZNF280BQ86YH2 543 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 SLC15A3Q8IY34 581 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 SLC15A4Q8N697 577 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 DNAJC5GQ8N7S2 189 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 ABHD11Q8NFV4 315 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 STAG1Q8WVM7 1258 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 KBTBD7Q8WVZ9 684 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 CXorf36Q9H7Y0 433 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 NRIP3Q9NQ35 241 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 STK26Q9P289 416 aa5.18□□□□□ -1.58
VMP1-205ENST00000587470 CCNL1Q9UK58 526 aaPredicted RBP5.18□□□□□ -1.58
VMP1-205ENST00000587470 ADGRB1O14514 1584 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 YTHDC2Q9H6S0 1430 aaKnown RBP5.17□□□□□ -1.58
VMP1-205ENST00000587470 A0A1W2PPL8 197 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 PPP6CO00743 305 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 TUBB4AP04350 444 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 CSF1RP07333 972 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 CYP2D6P10635 497 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 EPHB2P29323 1055 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 MPGP29372 298 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 DGKEP52429 567 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 GPSM2P81274 684 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 KRT17Q04695 432 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 DEPDC1Q5TB30 811 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 ZNF626Q68DY1 528 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 B3GNT9Q6UX72 402 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 ZNF783Q6ZMS7 281 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 YTHDF3Q7Z739 585 aaKnown RBP5.17□□□□□ -1.58
VMP1-205ENST00000587470 GAS2L3Q86XJ1 694 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 OSCP1Q8WVF1 389 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 SOCS4Q8WXH5 440 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 LRGUKQ96M69 825 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 ACO2Q99798 780 aaKnown RBP5.17□□□□□ -1.58
VMP1-205ENST00000587470 TRIM54Q9BYV2 358 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms