RNA–Protein interactions for RNA: ENST00000587135.1

HDAC5-205, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-205ENST00000587135 IFNAR2P48551 515 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 EXOC3L4Q17RC7 722 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 KLHDC10Q6PID8 442 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 DDX42Q86XP3 938 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC5-205ENST00000587135 RBBP8NLQ8NC74 664 aaPredicted RBP20.52■□□□□ 0.88
HDAC5-205ENST00000587135 TTC16Q8NEE8 873 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 UBA3Q8TBC4 463 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 ATOH1Q92858 354 aaPredicted RBP20.52■□□□□ 0.88
HDAC5-205ENST00000587135 ATP2A3Q93084 1043 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 CHRDQ9H2X0 955 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC5-205ENST00000587135 CFAP97Q9P2B7 532 aa20.52■□□□□ 0.88
HDAC5-205ENST00000587135 E2F8A0AVK6 867 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 TRDMT1O14717 391 aaKnown RBP20.51■□□□□ 0.87
HDAC5-205ENST00000587135 CALCAP01258 141 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 RARGP13631 454 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 GJA4P35212 333 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 PSEN1P49768 467 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 BCAT1P54687 386 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 SLC8A3P57103 927 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 APBA1Q02410 837 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 BST2Q10589 180 aaKnown RBP20.51■□□□□ 0.87
HDAC5-205ENST00000587135 PON2Q15165 354 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 VWA3BQ502W6 1294 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 GJB7Q6PEY0 223 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 ENOSF1Q7L5Y1 443 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 CPA6Q8N4T0 437 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 SLC35F5Q8WV83 523 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 KCTD13Q8WZ19 329 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 PHOX2BQ99453 314 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 TUBGCP2Q9BSJ2 902 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 KLF16Q9BXK1 252 aaPredicted RBP20.51■□□□□ 0.87
HDAC5-205ENST00000587135 NDST4Q9H3R1 872 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 FBRSL1Q9HCM7 1045 aaKnown RBP20.51■□□□□ 0.87
HDAC5-205ENST00000587135 CLIC5Q9NZA1 410 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 HESX1Q9UBX0 185 aa20.51■□□□□ 0.87
HDAC5-205ENST00000587135 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.51■□□□□ 0.87
HDAC5-205ENST00000587135 GREM1O60565 184 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 GABBR2O75899 941 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 ATP5C1P36542 298 aaKnown RBP20.5■□□□□ 0.87
HDAC5-205ENST00000587135 PLA2G4AP47712 749 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 GALK1P51570 392 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 TKTL1P51854 596 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 AMPD2Q01433 879 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 MTAPQ13126 283 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 CCINQ13939 588 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 GAS6Q14393 721 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 HSP90AA4PQ58FG1 418 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 TCP11X2Q5H9J9 407 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 TMEM196Q5HYL7 178 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 CCDC183Q5T5S1 534 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 SMYD5Q6GMV2 418 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 BHLHA9Q7RTU4 235 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 WBP2Q969T9 261 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 FAM81BQ96LP2 452 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 SIX2Q9NPC8 291 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 FAM86C1Q9NVL1 165 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 SPATA6Q9NWH7 488 aaPredicted RBP20.5■□□□□ 0.87
HDAC5-205ENST00000587135 APEX2Q9UBZ4 518 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 PATJQ8NI35 1801 aa20.5■□□□□ 0.87
HDAC5-205ENST00000587135 KCNJ18B7U540 433 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 SLC9A3R1O14745 358 aaPredicted RBP20.49■□□□□ 0.87
HDAC5-205ENST00000587135 SP9P0CG40 484 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 SETSIPP0DME0 302 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 BRD2P25440 801 aaKnown RBP20.49■□□□□ 0.87
HDAC5-205ENST00000587135 EEF1GP26641 437 aaKnown RBP20.49■□□□□ 0.87
HDAC5-205ENST00000587135 MFAP3P55082 362 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 KCNJ12Q14500 433 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 STILQ15468 1287 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 GAB4Q2WGN9 574 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 FSTL4Q6MZW2 842 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 SASS6Q6UVJ0 657 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 IER2Q9BTL4 223 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 RBM12Q9NTZ6 932 aaKnown RBP20.49■□□□□ 0.87
HDAC5-205ENST00000587135 ANO10Q9NW15 660 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 NAGPAQ9UK23 515 aa20.49■□□□□ 0.87
HDAC5-205ENST00000587135 CACNA1IQ9P0X4 2223 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 BECN2A8MW95 431 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 PROB1E7EW31 1015 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 NFATC1O95644 943 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 ZBED1O96006 694 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
HDAC5-205ENST00000587135 NBL1P41271 181 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 KCNMA1Q12791 1236 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 NR1H3Q13133 447 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 LRRC32Q14392 662 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 CDKAL1Q5VV42 579 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 NAIF1Q69YI7 327 aaPredicted RBP20.48■□□□□ 0.87
HDAC5-205ENST00000587135 PMF1Q6P1K2 205 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 RHBDF2Q6PJF5 856 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 HTR3DQ70Z44 454 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 SCML4Q8N228 414 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 SYNPOQ8N3V7 929 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 SHC3Q92529 594 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 NDRG1Q92597 394 aaKnown RBP20.48■□□□□ 0.87
HDAC5-205ENST00000587135 NACA2Q9H009 215 aa20.48■□□□□ 0.87
HDAC5-205ENST00000587135 TMEM63CQ9P1W3 806 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms