RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 MAMSTRQ6ZN01 415 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 SCD5Q86SK9 330 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 PIGZQ86VD9 579 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 IRF2BP1Q8IU81 584 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 MLKLQ8NB16 471 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 ANKRD52Q8NB46 1076 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 P2RY13Q9BPV8 354 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 NACA2Q9H009 215 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 NUP62CLQ9H1M0 184 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 TSPAN16Q9UKR8 245 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 PCDHB4Q9Y5E5 795 aa20.08■□□□□ 0.81
TPM4-204ENST00000586499 MDM4O15151 490 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 P4HA2O15460 535 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 NFATC1O95644 943 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 FGFR1OPO95684 399 aaKnown RBP20.07■□□□□ 0.8
TPM4-204ENST00000586499 TDGF1P13385 188 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 CXCL12P48061 93 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 AMPD2Q01433 879 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 NR1H3Q13133 447 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 GAB4Q2WGN9 574 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 DPCR1Q3MIW9 517 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 SGO2Q562F6 1265 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 TMEM270Q6UE05 265 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 SPEM1Q8N4L4 309 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 UBA3Q8TBC4 463 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 TFAP2BQ92481 460 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 CNOT6LQ96LI5 555 aaKnown RBP20.07■□□□□ 0.8
TPM4-204ENST00000586499 IER2Q9BTL4 223 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 USP3Q9Y6I4 520 aa20.07■□□□□ 0.8
TPM4-204ENST00000586499 CYP17A1P05093 508 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 RARGP13631 454 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 CCR3P51677 355 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 PDE4CQ08493 712 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 DHCR24Q15392 516 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 RHBDF2Q6PJF5 856 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 DDX42Q86XP3 938 aaKnown RBP eCLIP20.06■□□□□ 0.89e-6■□□□□ 9.6
TPM4-204ENST00000586499 EZH1Q92800 747 aaPredicted RBP20.06■□□□□ 0.8
TPM4-204ENST00000586499 NELL1Q92832 810 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 CD101Q93033 1021 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 KREMEN1Q96MU8 473 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 ZSWIM1Q9BR11 485 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 KLF16Q9BXK1 252 aaPredicted RBP20.06■□□□□ 0.8
TPM4-204ENST00000586499 INTS2Q9H0H0 1204 aaKnown RBP20.06■□□□□ 0.8
TPM4-204ENST00000586499 CYLDQ9NQC7 956 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.06■□□□□ 0.8
TPM4-204ENST00000586499 POLR3BQ9NW08 1133 aaPredicted RBP20.06■□□□□ 0.8
TPM4-204ENST00000586499 NAGPAQ9UK23 515 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 SH3BP1Q9Y3L3 701 aa20.06■□□□□ 0.8
TPM4-204ENST00000586499 E2F8A0AVK6 867 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 O00370 1275 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 SLC9A3R1O14745 358 aaPredicted RBP20.05■□□□□ 0.8
TPM4-204ENST00000586499 VDRP11473 427 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 ATP5C1P36542 298 aaKnown RBP20.05■□□□□ 0.8
TPM4-204ENST00000586499 OPRD1P41143 372 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 DMWDQ09019 674 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 RAB41Q5JT25 222 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 ZC3H14Q6PJT7 736 aaKnown RBP20.05■□□□□ 0.8
TPM4-204ENST00000586499 CCDC186Q7Z3E2 898 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 BBS7Q8IWZ6 715 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 SYNPOQ8N3V7 929 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 ZBTB44Q8NCP5 570 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 NDRG1Q92597 394 aaKnown RBP20.05■□□□□ 0.8
TPM4-204ENST00000586499 CRACR2AQ9BSW2 395 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 UBXN6Q9BZV1 441 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 ZSCAN32Q9NX65 697 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 FANCMQ8IYD8 2048 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 WDR87Q6ZQQ6 2873 aa20.05■□□□□ 0.8
TPM4-204ENST00000586499 ATG2BQ96BY7 2078 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 ANTXRLA6NF34 631 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 RNF40O75150 1001 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 DRD1P21728 446 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 SLC6A11P48066 632 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 TKTL1P51854 596 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 C10orf120Q5SQS8 335 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 KIAA1958Q8N8K9 716 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 GPT2Q8TD30 523 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 ATRIPQ8WXE1 791 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 HESX1Q9UBX0 185 aa20.04■□□□□ 0.8
TPM4-204ENST00000586499 K7ESF4 209 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 XPO1O14980 1071 aaKnown RBP20.03■□□□□ 0.8
TPM4-204ENST00000586499 GREM1O60565 184 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 LMNAP02545 664 aaKnown RBP20.03■□□□□ 0.8
TPM4-204ENST00000586499 PAEPP09466 180 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 BRD2P25440 801 aaKnown RBP20.03■□□□□ 0.8
TPM4-204ENST00000586499 BCAT1P54687 386 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 SLC8A3P57103 927 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 APBA1Q02410 837 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 GCNT1Q02742 428 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 MESP2Q0VG99 397 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 TPD52L1Q16890 204 aaPredicted RBP20.03■□□□□ 0.8
TPM4-204ENST00000586499 HSP90AA4PQ58FG1 418 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 LY6G5CQ5SRR4 150 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 GJB7Q6PEY0 223 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 C12orf40Q86WS4 652 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 RBBP8NLQ8NC74 664 aaPredicted RBP20.03■□□□□ 0.8
TPM4-204ENST00000586499 ULBP1Q9BZM6 244 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 UBE2TQ9NPD8 197 aaPredicted RBP20.03■□□□□ 0.8
TPM4-204ENST00000586499 TBC1D14Q9P2M4 693 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 KIAA1257Q9ULG3 409 aa20.03■□□□□ 0.8
TPM4-204ENST00000586499 PCDHGA2Q9Y5H1 932 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms