RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 CACNA1HO95180 2353 aa11.24□□□□□ -0.61
SAFB2-202ENST00000585449 PRR23AA6NEV1 266 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 ANTXRLA6NF34 631 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 IRF1P10914 325 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 VDRP11473 427 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 RARGP13631 454 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 ATP5C1P36542 298 aaKnown RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 CXCL12P48061 93 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 SLC6A11P48066 632 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 TUBP50607 506 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 YWHAEP62258 255 aaKnown RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 AMPD2Q01433 879 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 PDE4CQ08493 712 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 GRSF1Q12849 480 aaKnown RBP eCLIP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 NR1H3Q13133 447 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 DHCR24Q15392 516 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 GAB4Q2WGN9 574 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 ZNF528Q3MIS6 628 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 DPCR1Q3MIW9 517 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 SGO2Q562F6 1265 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 PKN3Q6P5Z2 889 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 RHBDF2Q6PJF5 856 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 SPEM1Q8N4L4 309 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 CD101Q93033 1021 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 CNOT6LQ96LI5 555 aaKnown RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 KREMEN1Q96MU8 473 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 ZSWIM1Q9BR11 485 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 CRACR2AQ9BSW2 395 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 KLF16Q9BXK1 252 aaPredicted RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 UBXN6Q9BZV1 441 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 PRMT8Q9NR22 394 aaPredicted RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 POLR3BQ9NW08 1133 aaPredicted RBP11.23□□□□□ -0.61
SAFB2-202ENST00000585449 NAGPAQ9UK23 515 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 SH3BP1Q9Y3L3 701 aa11.23□□□□□ -0.61
SAFB2-202ENST00000585449 E2F8A0AVK6 867 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 O00370 1275 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 NFATC1O95644 943 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 CYP17A1P05093 508 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 TDGF1P13385 188 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 SLC9A1P19634 815 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 OPRD1P41143 372 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 CCR3P51677 355 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 TKTL1P51854 596 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 APBA1Q02410 837 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 DMWDQ09019 674 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
SAFB2-202ENST00000585449 HSP90AA4PQ58FG1 418 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 RAB41Q5JT25 222 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 GJB7Q6PEY0 223 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 DDX42Q86XP3 938 aaKnown RBP eCLIP11.22□□□□□ -0.61
SAFB2-202ENST00000585449 BBS7Q8IWZ6 715 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 SYNPOQ8N3V7 929 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 NELL1Q92832 810 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 UBE2TQ9NPD8 197 aaPredicted RBP11.22□□□□□ -0.61
SAFB2-202ENST00000585449 CYLDQ9NQC7 956 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.22□□□□□ -0.617e-11■□□□□ 10.2
SAFB2-202ENST00000585449 HESX1Q9UBX0 185 aa11.22□□□□□ -0.61
SAFB2-202ENST00000585449 PIK3R2O00459 728 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 SLC9A3R1O14745 358 aaPredicted RBP11.21□□□□□ -0.61
SAFB2-202ENST00000585449 XPO1O14980 1071 aaKnown RBP11.21□□□□□ -0.61
SAFB2-202ENST00000585449 GREM1O60565 184 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 RNF40O75150 1001 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 GABBR2O75899 941 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 PAEPP09466 180 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 DRD1P21728 446 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 BRD2P25440 801 aaKnown RBP11.21□□□□□ -0.61
SAFB2-202ENST00000585449 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
SAFB2-202ENST00000585449 SLC8A3P57103 927 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 GCNT1Q02742 428 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 MESP2Q0VG99 397 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 C10orf120Q5SQS8 335 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 LY6G5CQ5SRR4 150 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 LCLAT1Q6UWP7 414 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 C12orf40Q86WS4 652 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 KIAA1958Q8N8K9 716 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 NAT16Q8N8M0 369 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 RBBP8NLQ8NC74 664 aaPredicted RBP11.21□□□□□ -0.61
SAFB2-202ENST00000585449 ZBTB44Q8NCP5 570 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 GBP4Q96PP9 640 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 IER2Q9BTL4 223 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 ZSCAN32Q9NX65 697 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 TBC1D14Q9P2M4 693 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 KIAA1257Q9ULG3 409 aa11.21□□□□□ -0.61
SAFB2-202ENST00000585449 PATJQ8NI35 1801 aa11.21□□□□□ -0.62
SAFB2-202ENST00000585449 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
SAFB2-202ENST00000585449 HELZP42694 1942 aaKnown RBP11.2□□□□□ -0.62
SAFB2-202ENST00000585449 CHURC1-FNTBB4DL54 471 aa11.2□□□□□ -0.62
SAFB2-202ENST00000585449 K7ESF4 209 aa11.2□□□□□ -0.62
SAFB2-202ENST00000585449 ZBED1O96006 694 aa11.2□□□□□ -0.62
SAFB2-202ENST00000585449 LMNAP02545 664 aaKnown RBP11.2□□□□□ -0.62
SAFB2-202ENST00000585449 RALAP11233 206 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms