RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 ANP32EQ9BTT0 268 aa24.52■■□□□ 1.52
LSM7-203ENST00000585409 VPS16Q9H269 839 aa24.52■■□□□ 1.52
LSM7-203ENST00000585409 ARRDC1-AS1Q9H2J1 176 aa24.52■■□□□ 1.52
LSM7-203ENST00000585409 CBX8Q9HC52 389 aa24.52■■□□□ 1.52
LSM7-203ENST00000585409 HPS4Q9NQG7 708 aa24.52■■□□□ 1.52
LSM7-203ENST00000585409 GKN1Q9NS71 199 aa24.52■■□□□ 1.52
LSM7-203ENST00000585409 ZFHX4Q86UP3 3567 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 TRDMT1O14717 391 aaKnown RBP24.51■■□□□ 1.51
LSM7-203ENST00000585409 AXIN1O15169 862 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 HAPLN1P10915 354 aaPredicted RBP24.51■■□□□ 1.51
LSM7-203ENST00000585409 MAGEA11P43364 429 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 MFAP3P55082 362 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 IQCB1Q15051 598 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 SF3A2Q15428 464 aaKnown RBP24.51■■□□□ 1.51
LSM7-203ENST00000585409 AASDHQ4L235 1098 aaPredicted RBP24.51■■□□□ 1.51
LSM7-203ENST00000585409 MDH1BQ5I0G3 518 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 FSTL4Q6MZW2 842 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 VSTM1Q6UX27 236 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 CACNA2D4Q7Z3S7 1137 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 MYLPFQ96A32 169 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 PKMYT1Q99640 499 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 ELOVL4Q9GZR5 314 aa24.51■■□□□ 1.51
LSM7-203ENST00000585409 KIAA1549LQ6ZVL6 1849 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 CFAP47Q6ZTR5 3102 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 MYO16Q9Y6X6 1858 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 OTOL1A6NHN0 477 aaPredicted RBP24.5■■□□□ 1.51
LSM7-203ENST00000585409 RPP40O75818 363 aaKnown RBP24.5■■□□□ 1.51
LSM7-203ENST00000585409 TAF12Q16514 161 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 IL31Q6EBC2 164 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 ACOT1Q86TX2 421 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 KBTBD6Q86V97 674 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 CEP295NLQ96MC4 621 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 MED10Q9BTT4 135 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 CRTAC1Q9NQ79 661 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 RXFP3Q9NSD7 469 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 APEX2Q9UBZ4 518 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 CCL26Q9Y258 94 aa24.5■■□□□ 1.51
LSM7-203ENST00000585409 LRRC10BA6NIK2 292 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 ATG13O75143 517 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 ATP2C2O75185 946 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 HMGA1P17096 107 aaKnown RBP24.49■■□□□ 1.51
LSM7-203ENST00000585409 ANXA13P27216 316 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 PMLP29590 882 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 PXNP49023 591 aaPredicted RBP24.49■■□□□ 1.51
LSM7-203ENST00000585409 CDR1P51861 262 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 GRSF1Q12849 480 aaKnown RBP eCLIP24.49■■□□□ 1.51
LSM7-203ENST00000585409 RUNX3Q13761 415 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 PLA2G2CQ5R387 149 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 C12orf50Q8NA57 414 aaPredicted RBP24.49■■□□□ 1.51
LSM7-203ENST00000585409 GIPC2Q8TF65 315 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 PCED1BQ96HM7 432 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 DPEP3Q9H4B8 488 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 UBE2TQ9NPD8 197 aaPredicted RBP24.49■■□□□ 1.51
LSM7-203ENST00000585409 TMLHEQ9NVH6 421 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 KIAA1257Q9ULG3 409 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 DAAM1Q9Y4D1 1078 aa24.49■■□□□ 1.51
LSM7-203ENST00000585409 LGALS16A8MUM7 142 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 TRIM66O15016 1216 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 HCRTO43612 131 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 F11P03951 625 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 SLC9A1P19634 815 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 PON1P27169 355 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 ZNF445P59923 1031 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 CCDC6Q16204 474 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 N4BP2L1Q5TBK1 243 aaPredicted RBP24.48■■□□□ 1.51
LSM7-203ENST00000585409 USP13Q92995 863 aaPredicted RBP24.48■■□□□ 1.51
LSM7-203ENST00000585409 TMEM176AQ96HP8 235 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 ZC3H10Q96K80 434 aaKnown RBP24.48■■□□□ 1.51
LSM7-203ENST00000585409 ARID3AQ99856 593 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 EBF3Q9H4W6 596 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 EHD2Q9NZN4 543 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 ANGPTL2Q9UKU9 493 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 PCDHB4Q9Y5E5 795 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 PCDHGA5Q9Y5G8 931 aa24.48■■□□□ 1.51
LSM7-203ENST00000585409 SOBPA7XYQ1 873 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 SERPINC1P01008 464 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 DDX6P26196 483 aaKnown RBP eCLIP24.47■■□□□ 1.512e-15■□□□□ 9.7
LSM7-203ENST00000585409 AVPR1AP37288 418 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 SHC2P98077 582 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 TRIM68Q6AZZ1 485 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 RRAGAQ7L523 313 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 LUZP1Q86V48 1076 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 RIN3Q8TB24 985 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 PCMTD1Q96MG8 357 aaPredicted RBP24.47■■□□□ 1.51
LSM7-203ENST00000585409 HEXIM2Q96MH2 286 aaKnown RBP24.47■■□□□ 1.51
LSM7-203ENST00000585409 KIF9Q9HAQ2 790 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 TDP1Q9NUW8 608 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 SLC8A2Q9UPR5 921 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 LAMA1P25391 3075 aa24.47■■□□□ 1.51
LSM7-203ENST00000585409 CHD6Q8TD26 2715 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 PAEPP09466 180 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 GRIK1P39086 918 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 UBXN1Q04323 297 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 ZNF394Q53GI3 561 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 ARHGEF19Q8IW93 802 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 SCN4BQ8IWT1 228 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 CAMKK1Q8N5S9 505 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 MAB21L3Q8N8X9 362 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 SMARCD1Q96GM5 515 aa24.46■■□□□ 1.51
LSM7-203ENST00000585409 HSD3B7Q9H2F3 369 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms