RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 SYCE1Q8N0S2 351 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 SLC35F6Q8N357 371 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 NDRG1Q92597 394 aaKnown RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 TRMT2BQ96GJ1 504 aaKnown RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 DDX23Q9BUQ8 820 aaKnown RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 TRIM62Q9BVG3 475 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
SS18-226ENST00000585241 ASB3Q9Y575 518 aa16.92■□□□□ 0.3
SS18-226ENST00000585241 ZNF638Q14966 1978 aaKnown RBP16.91■□□□□ 0.3
SS18-226ENST00000585241 MYO16Q9Y6X6 1858 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 LAMA3Q16787 3333 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 LTFP02788 710 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 FYNP06241 537 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 C8AP07357 584 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 POU2F2P09086 479 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 ZDHHC11BP0C7U3 371 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 GPD1P21695 349 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 YWHAQP27348 245 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 HOXA9P31269 272 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 MATKP42679 507 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 SLC1A1P43005 524 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 PTPN9P43378 593 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 GNG11P61952 73 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 YWHAZP63104 245 aaKnown RBP16.91■□□□□ 0.3
SS18-226ENST00000585241 TWF1Q12792 350 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 PIGHQ14442 188 aaPredicted RBP16.91■□□□□ 0.3
SS18-226ENST00000585241 VEPH1Q14D04 833 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 ACAP1Q15027 740 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 PTPROQ16827 1216 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 DUSP6Q16828 381 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 ADGRD2Q7Z7M1 963 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 SCD5Q86SK9 330 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 MON1AQ86VX9 555 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 ARHGAP18Q8N392 663 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 EMC1Q8N766 993 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 SLC7A14Q8TBB6 771 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 GIPC2Q8TF65 315 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 RXFP2Q8WXD0 754 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 NT5C3BQ969T7 300 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 PSMG2Q969U7 264 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 BTBD6Q96KE9 485 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 WDR24Q96S15 920 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 CDCA3Q99618 268 aaPredicted RBP16.91■□□□□ 0.3
SS18-226ENST00000585241 ZNF576Q9H609 170 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 POPDC2Q9HBU9 364 aa16.91■□□□□ 0.3
SS18-226ENST00000585241 FANCGO15287 622 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 GRAP2O75791 330 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 ZMYND10O75800 440 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 CSPG5O95196 566 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 NOS2P35228 1153 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 PSEN1P49768 467 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 EPHB3P54753 998 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
SS18-226ENST00000585241 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 KCNC3Q14003 757 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 MESDQ14696 234 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 BNIPLQ7Z465 357 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 DAAM2Q86T65 1068 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 NT5DC3Q86UY8 548 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 DEFB106AQ8N104 65 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 GPR152Q8TDT2 470 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 FAM149B1Q96BN6 582 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 CNPY3Q9BT09 278 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 RRN3Q9NYV6 651 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.9■□□□□ 0.3
SS18-226ENST00000585241 LMCD1Q9NZU5 365 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 DPP7Q9UHL4 492 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 ALG6Q9Y672 507 aa16.9■□□□□ 0.3
SS18-226ENST00000585241 TRIOBPQ9H2D6 2365 aa16.89■□□□□ 0.3
SS18-226ENST00000585241 RFXAPO00287 272 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 SPATA31D3P0C874 917 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 PDGFRAP16234 1089 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 PSMA2P25787 234 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 SDC4P31431 198 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 TAF10Q12962 218 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 CCDC14Q49A88 953 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 PRPF38BQ5VTL8 546 aaKnown RBP16.89■□□□□ 0.29
SS18-226ENST00000585241 SNX30Q5VWJ9 437 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 BSPRYQ5W0U4 402 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 SPATA31D4Q6ZUB0 917 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 ITIH5Q86UX2 942 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 ZNF276Q8N554 614 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.89■□□□□ 0.29
SS18-226ENST00000585241 CENPIQ92674 756 aaPredicted RBP16.89■□□□□ 0.29
SS18-226ENST00000585241 CD101Q93033 1021 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 NPY6RQ99463 290 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 GOLPH3Q9H4A6 298 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 NMUR1Q9HB89 426 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 MAN1C1Q9NR34 630 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 CLIC5Q9NZA1 410 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 GMIPQ9P107 970 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 UXTQ9UBK9 157 aaPredicted RBP16.89■□□□□ 0.29
SS18-226ENST00000585241 JRKLQ9Y4A0 524 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms