RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 MSH4O15457 936 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TRIM28Q13263 835 aaKnown RBP13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FAM172AQ8WUF8 416 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CRAMP1Q96RY5 1269 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SH3GL1Q99961 368 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SESN1Q9Y6P5 492 aa13.68□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MGAT4DA6NG13 374 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CBWD2Q8IUF1 395 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CARNMT1Q8N4J0 409 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 GPRC5AQ8NFJ5 357 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 LRRC40Q9H9A6 602 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 DIABLOQ9NR28 239 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 EIF2S1P05198 315 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MUTP22033 750 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ALDH7A1P49419 539 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ARMCX4Q5H9R4 360 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 REXO1L1PQ8IX06 675 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ASZ1Q8WWH4 475 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RSPH1Q8WYR4 309 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TMEM121Q9BTD3 319 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RPS6KB2Q9UBS0 482 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CYP11B2P19099 503 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RAP1GAPP47736 663 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CPT1AP50416 773 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SLFN11Q7Z7L1 901 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RDM1Q8NG50 284 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FICDQ9BVA6 458 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CLPBQ9H078 707 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PADI4Q9UM07 663 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 USP42Q9H9J4 1324 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 BGNP21810 368 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 GRK2P25098 689 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CSHL1Q14406 222 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RASA2Q15283 850 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PLEKHA7Q6IQ23 1121 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CCNJLQ8IV13 435 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TDRD5Q8NAT2 981 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PPP1R14AQ96A00 147 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 UNKQ9C0B0 810 aaKnown RBP13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 WHRNQ9P202 907 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TAGLN3Q9UI15 199 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 LAMC1P11047 1609 aa13.67□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PDZK1P1A8MUH7 402 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PSMD7P51665 324 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FAM151AQ8WW52 585 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FBXO32Q969P5 355 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TMBIM4Q9HC24 238 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 C17orf102A2RUQ5 167 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 B3GAT3O94766 335 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 BAIAP3O94812 1187 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 FYNP06241 537 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MBL2P11226 248 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CALB2P22676 271 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PDK2Q15119 407 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PDPK2PQ6A1A2 396 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 NMD3Q96D46 503 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 KLHL4Q9C0H6 718 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CDC42EP4Q9H3Q1 356 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CYP11B1P15538 503 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 NUP62P37198 522 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 THPOP40225 353 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 GUCA1AP43080 201 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 OXCT1P55809 520 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 TIGD7Q6NT04 549 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CASP10Q92851 521 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 VTA1Q9NP79 307 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PLA2G6O60733 806 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MT-CO1P00395 513 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CCL15Q16663 113 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 SIKE1Q9BRV8 207 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 DYRK1BQ9Y463 629 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 KANSL1LA0AUZ9 987 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 MAP3K13O43283 966 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 RPL10AP62906 217 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 KRR1Q13601 381 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 PRR5LQ6MZQ0 368 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 IZUMO2Q6UXV1 221 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 NYAP1Q6ZVC0 841 aa13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 KCTD14Q9BQ13 255 aaPredicted RBP13.66□□□□□ -0.22
RAB11FIP4-210ENST00000585058 GPAMQ9HCL2 828 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms