RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 HASPINQ8TF76 798 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ARHGEF2Q92974 986 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PRMT1Q99873 361 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PCDH10Q9P2E7 1040 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CFAP73A6NFT4 308 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 KIAA0355O15063 1070 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CDH16O75309 829 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RAG1P15918 1043 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DSC1Q08554 894 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TIGD5Q53EQ6 642 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LRRC38Q5VT99 294 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 WSCD1Q658N2 575 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DENND1BQ6P3S1 775 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CD300LGQ6UXG3 332 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.67■□□□□ 0.11e-10■■■■■ 46
CDK5RAP3-236ENST00000584991 OSTM1Q86WC4 334 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RCOR2Q8IZ40 523 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CRIPAKQ8N1N5 446 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 C12orf29Q8N999 325 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 C1orf54Q8WWF1 131 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CASD1Q96PB1 797 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FAM193BQ96PV7 902 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DPEP3Q9H4B8 488 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PARVAQ9NVD7 372 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CHORDC1Q9UHD1 332 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 IP6K2Q9UHH9 426 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 F8W810 466 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 I3L4J1 428 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 O00370 1275 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LSM8O95777 96 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ADCY8P40145 1251 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 BRCC3P46736 316 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ITGA8P53708 1063 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SLC18A1P54219 525 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TAP1Q03518 808 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 C2CD6Q53TS8 623 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DCLRE1AQ6PJP8 1040 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ZNF365Q70YC5 407 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CCDC91Q7Z6B0 441 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CCDC25Q86WR0 208 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 COLGALT2Q8IYK4 626 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LRRC34Q8IZ02 419 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 WDTC1Q8N5D0 677 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TMEM35BQ8NCS4 154 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 GRAMD1AQ96CP6 724 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RBM41Q96IZ5 413 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LPIN3Q9BQK8 851 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CHST7Q9NS84 486 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ADAM22Q9P0K1 906 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 KIAA1257Q9ULG3 409 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SLC12A4Q9UP95 1085 aa15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TIMM13Q9Y5L4 95 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FNDC1Q4ZHG4 1894 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SNX3O60493 162 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 MICAL2O94851 1124 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ITGB1P05556 798 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CSF2RAP15509 400 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PTPN7P35236 360 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 MAMLD1Q13495 774 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CYB5D1Q6P9G0 228 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ARHGEF18Q6ZSZ5 1173 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TRPM8Q7Z2W7 1104 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 NPAS4Q8IUM7 802 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TTC25Q96NG3 672 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 C11orf70Q9BRQ4 267 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 OSBPL8Q9BZF1 889 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ZNF518BQ9C0D4 1074 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FAM49BQ9NUQ9 324 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DNAJB4Q9UDY4 337 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DRG1Q9Y295 367 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CEP83Q9Y592 693 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ALPK3Q96L96 1907 aa15.66■□□□□ 0.1
CDK5RAP3-236ENST00000584991 HOXA2O43364 376 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 UPP2O95045 317 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 OAS1P00973 400 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 VIMP08670 466 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FAM163BP0C2L3 166 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CDH5P33151 784 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 OR1G1P47890 313 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RIPK1Q13546 671 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SNCBQ16143 134 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PPP1R26Q5T8A7 1209 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PPP1R21Q6ZMI0 780 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PHLDB2Q86SQ0 1253 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PARP9Q8IXQ6 854 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FEZF2Q8TBJ5 459 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DYDC1Q8WWB3 177 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LHX5Q9H2C1 402 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TSPAN16Q9UKR8 245 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TBKBP1A7MCY6 615 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 M0QYV0 167 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 GABRDO14764 452 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 MGRN1O60291 552 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SUN1O94901 812 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CALB1P05937 261 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SLC8A1P32418 973 aa15.65■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RDXP35241 583 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms