RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	FTL	P02792	175 aa	Predicted RBP	10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CYP1A2	P05177	515 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	RHO	P08100	348 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TCF3	P15923	654 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CA8	P35219	290 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CDR1	P51861	262 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SNX16	P57768	344 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SLC6A3	Q01959	620 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	GFPT1	Q06210	699 aa	Predicted RBP	10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TAF10	Q12962	218 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	VEPH1	Q14D04	833 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SLC5A9	Q2M3M2	681 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	PABPC1L	Q4VXU2	614 aa	Known RBP	10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ZNF662	Q6ZS27	426 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	VPS36	Q86VN1	386 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ERICH1	Q86X53	443 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SCUBE3	Q8IX30	993 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	KIAA1958	Q8N8K9	716 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	C3orf20	Q8ND61	904 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	PDZD8	Q8NEN9	1154 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	GPR152	Q8TDT2	470 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CCDC42	Q96M95	316 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SLC2A13	Q96QE2	648 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ULBP1	Q9BZM6	244 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	NMUR1	Q9HB89	426 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	HCFC1R1	Q9NWW0	138 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	OSER1	Q9NX31	292 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CLDND1	Q9NY35	253 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ADAM22	Q9P0K1	906 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CLUH	O75153	1309 aa		10.48	□□□□□ -0.73
EIF4A1-231	ENST00000584054	DENND4A	Q7Z401	1863 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ZNF638	Q14966	1978 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SOWAHD	A6NJG2	315 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SIGLEC16	A6NMB1	481 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	BTNL10	A8MVZ5	291 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ZNF197	O14709	1029 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	PJA2	O43164	708 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ARHGAP6	O43182	974 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MTA2	O94776	668 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ENDOD1	O94919	500 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	NDUFA10	O95299	355 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CALB1	P05937	261 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MYBL1	P10243	752 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	DDX6	P26196	483 aa	Known RBP eCLIP	10.47	□□□□□ -0.73	3e-7	■■□□□ 13.5
EIF4A1-231	ENST00000584054	CDC25C	P30307	473 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MTHFR	P42898	656 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	NSF	P46459	744 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	RGS7	P49802	495 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	HADHB	P55084	474 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ADIG	Q0VDE8	80 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SMAD4	Q13485	552 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TDRD12	Q587J7	1177 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MSANTD2	Q6P1R3	559 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TMC5	Q6UXY8	1006 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	FAM183BP	Q6ZVS7	135 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ARHGAP18	Q8N392	663 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SHKBP1	Q8TBC3	707 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CLEC4C	Q8WTT0	213 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SMG7	Q92540	1137 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	PGAP3	Q96FM1	320 aa	Predicted RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	PIWIL1	Q96J94	861 aa	Known RBP	10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	NECTIN4	Q96NY8	510 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	KCNF1	Q9H3M0	494 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TRPV4	Q9HBA0	871 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	LRRC4	Q9HBW1	653 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.47	□□□□□ -0.73	8e-7	■■□□□ 13.6
EIF4A1-231	ENST00000584054	CD207	Q9UJ71	328 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	STRIP2	Q9ULQ0	834 aa		10.47	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MBTPS2	O43462	519 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	NRDC	O43847	1150 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	AKR1B10	O60218	316 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	USP17L7	P0C7H9	530 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TMEM253	P0C7T8	217 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	RRM1	P23921	792 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CYLC1	P35663	651 aa	Predicted RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	GALC	P54803	685 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	YWHAZ	P63104	245 aa	Known RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SLC7A9	P82251	487 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MAMLD1	Q13495	774 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MTF1	Q14872	753 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TAF5	Q15542	800 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	SMAD2	Q15796	467 aa	Known RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	PUS10	Q3MIT2	529 aa	Known RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	EFHC1	Q5JVL4	640 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ATAT1	Q5SQI0	421 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CCDC122	Q5T0U0	273 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	RARS2	Q5T160	578 aa	Known RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	BSPRY	Q5W0U4	402 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	TRNP1	Q6NT89	227 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MMS22L	Q6ZRQ5	1243 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	HFE2	Q6ZVN8	426 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	ELMOD1	Q8N336	334 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	MSANTD4	Q8NCY6	345 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	STKLD1	Q8NE28	680 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	IPO4	Q8TEX9	1081 aa	Known RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	FNIP1	Q8TF40	1166 aa		10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	NDRG1	Q92597	394 aa	Known RBP	10.46	□□□□□ -0.73
EIF4A1-231	ENST00000584054	CENPI	Q92674	756 aa	Predicted RBP	10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms