RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
SKA2-209ENST00000583976 EBF1Q9UH73 591 aa16.62■□□□□ 0.25
SKA2-209ENST00000583976 BCLAF3A2AJT9 711 aaKnown RBP16.61■□□□□ 0.25
SKA2-209ENST00000583976 TACC1O75410 805 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
SKA2-209ENST00000583976 PDE6CP51160 858 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 PAK1Q13153 545 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 DHCR24Q15392 516 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 NFIL3Q16649 462 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 EDRF1Q3B7T1 1238 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 DPCR1Q3MIW9 517 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 WDR72Q3MJ13 1102 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 PSAPL1Q6NUJ1 521 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 TMEM92Q6UXU6 159 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 RASSF3Q86WH2 238 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 ALLCQ8N6M5 410 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 B3GALNT2Q8NCR0 500 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 DDX1Q92499 740 aaKnown RBP16.61■□□□□ 0.25
SKA2-209ENST00000583976 EXOC4Q96A65 974 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 ZFRQ96KR1 1074 aaKnown RBP16.61■□□□□ 0.25
SKA2-209ENST00000583976 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
SKA2-209ENST00000583976 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 ELOVL4Q9GZR5 314 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 SDCBP2Q9H190 292 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 MMP17Q9ULZ9 603 aa16.61■□□□□ 0.25
SKA2-209ENST00000583976 GIPC1O14908 333 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 CETN3O15182 167 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 CLSTN1O94985 981 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 CAVIN2O95810 425 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 MBL2P11226 248 aaPredicted RBP16.6■□□□□ 0.25
SKA2-209ENST00000583976 PTPN1P18031 435 aaKnown RBP16.6■□□□□ 0.25
SKA2-209ENST00000583976 LRRC63Q05C16 580 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 NR1H3Q13133 447 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 ORC1Q13415 861 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 KLHL40Q2TBA0 621 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 SASS6Q6UVJ0 657 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 RBM43Q6ZSC3 357 aaKnown RBP16.6■□□□□ 0.25
SKA2-209ENST00000583976 FAM35AQ86V20 835 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 MLKLQ8NB16 471 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 TMEM174Q8WUU8 243 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 RLN3Q8WXF3 142 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 LSM14BQ9BX40 385 aaKnown RBP16.6■□□□□ 0.25
SKA2-209ENST00000583976 ANGPTL2Q9UKU9 493 aa16.6■□□□□ 0.25
SKA2-209ENST00000583976 BICDL2A1A5D9 508 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 C4orf47A7E2U8 309 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 A8MXQ7 604 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 SGK1O00141 431 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 KCNK5O95279 499 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 KLF8O95600 359 aaPredicted RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 TIE1P35590 1138 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 PSMC2P35998 433 aaKnown RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 CDH8P55286 799 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 DLG4P78352 724 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 FKBP3Q00688 224 aaKnown RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 CRY1Q16526 586 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 TDRD10Q5VZ19 366 aaKnown RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 TTI2Q6NXR4 508 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 FRMD1Q8N878 549 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 TXNDC5Q8NBS9 432 aaKnown RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 SCAMP5Q8TAC9 235 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 WBP2Q969T9 261 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 CEP295NLQ96MC4 621 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 KCNK16Q96T55 309 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 HMGXB4Q9UGU5 601 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 ATXN2Q99700 1313 aaKnown RBP16.59■□□□□ 0.25
SKA2-209ENST00000583976 SPEGQ15772 3267 aa16.59■□□□□ 0.25
SKA2-209ENST00000583976 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.25
SKA2-209ENST00000583976 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.24
SKA2-209ENST00000583976 COCHO43405 550 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 RHOBTB1O94844 696 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 ADH5P11766 374 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 PFKLP17858 780 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 PGFP49763 221 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 NOVA1P51513 510 aaKnown RBP16.58■□□□□ 0.24
SKA2-209ENST00000583976 SLC5A3P53794 718 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 ZNF699Q32M78 642 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 RHBDF2Q6PJF5 856 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 CYP2U1Q7Z449 544 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 PHTF2Q8N3S3 785 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 IL17RCQ8NAC3 791 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 FBXO32Q969P5 355 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 SLITRK1Q96PX8 696 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 CCSER2Q9H7U1 834 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 KRT82Q9NSB4 513 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 GMIPQ9P107 970 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 IGF2RP11717 2491 aa16.58■□□□□ 0.24
SKA2-209ENST00000583976 CHD6Q8TD26 2715 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 ADAM23O75077 832 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 KAT7O95251 611 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 STAU1O95793 577 aaKnown RBP16.57■□□□□ 0.24
SKA2-209ENST00000583976 IRF1P10914 325 aa16.57■□□□□ 0.24
SKA2-209ENST00000583976 EPB41P11171 864 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms