RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF667Q5HYK9 610 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TMEM196Q5HYL7 178 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TDRD10Q5VZ19 366 aaKnown RBP9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PPP1R2P3Q6NXS1 205 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HS6ST3Q8IZP7 471 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TOP6BLQ8N6T0 577 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HPDLQ96IR7 371 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MTMR12Q9C0I1 747 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 IKZF4Q9H2S9 585 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNHIT6Q9NWK9 470 aaKnown RBP9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GDAP2Q9NXN4 497 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EBF1Q9UH73 591 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 KIAA1257Q9ULG3 409 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MAFFQ9ULX9 164 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LUC7L2Q9Y383 392 aaKnown RBP9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SPAARA0A1B0GVQ0 90 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 KPNA7A9QM74 516 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DPYSL4O14531 572 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 DCLK1O15075 740 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 RNF40O75150 1001 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SEC24AO95486 1093 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 APBB3O95704 486 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HLA-DRAP01903 254 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ITGB3P05106 788 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 KRT19P08727 400 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TRIM49P0CI25 452 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TRIM49CP0CI26 452 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 UCHL3P15374 230 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 GJA1P17302 382 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 NOP14P78316 857 aaKnown RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZBED6P86452 979 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TWF1Q12792 350 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SYCP1Q15431 976 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 UPP1Q16831 310 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ITPRIPL2Q3MIP1 535 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CBWD6Q4V339 395 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SEZ6Q53EL9 994 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CBWD3Q5JTY5 395 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CBWD5Q5RIA9 395 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 C1orf220Q5T0J3 134 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 C9orf57Q5W0N0 161 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 RAB44Q7Z6P3 723 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PIP4P1Q86T03 277 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 EFCAB13Q8IY85 973 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 C1orf127Q8N9H9 656 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CCDC112Q8NEF3 446 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 APPL2Q8NEU8 664 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TTC8Q8TAM2 541 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ZFYVE19Q96K21 471 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 NAP1L5Q96NT1 182 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HHIPQ96QV1 700 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SPAG5Q96R06 1193 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 NUSAP1Q9BXS6 441 aaKnown RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 STK33Q9BYT3 514 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 NIF3L1Q9GZT8 377 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 INTS2Q9H0H0 1204 aaKnown RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CCDC86Q9H6F5 360 aaKnown RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 AFF4Q9UHB7 1163 aaKnown RBP9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CAPN11Q9UMQ6 739 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SIK3Q9Y2K2 1263 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 NUB1Q9Y5A7 615 aa9.27□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PCDH15Q96QU1 1955 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PATE3B3GLJ2 98 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 H7C4K7 107 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SYN3O14994 580 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MEFVO15553 781 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HUS1O60921 280 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TACC1O75410 805 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ODC1P11926 461 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 STAT1P42224 750 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 LHX1P48742 406 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CLCNKBP51801 687 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 IRX4P78413 519 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CDK17Q00537 523 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SMARCB1Q12824 385 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SEMA3BQ13214 749 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 PLD1Q13393 1074 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 HNRNPDQ14103 355 aaKnown RBP9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ARID5BQ14865 1188 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 STILQ15468 1287 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 MAPRE1Q15691 268 aaKnown RBP9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 FBXO43Q4G163 708 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 KLHDC7AQ5VTJ3 777 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 FSTL4Q6MZW2 842 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 SYT13Q7L8C5 426 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 VPS36Q86VN1 386 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 UNC93AQ86WB7 457 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 METTL23Q86XA0 190 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TMC8Q8IU68 726 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 ARID3BQ8IVW6 561 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 TXLNBQ8N3L3 684 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 CHCHD4Q8N4Q1 142 aa9.26□□□□□ -0.93
PDLIM1P3-201ENST00000582370 OR5B17Q8NGF7 314 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms