RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 UCMAQ8WVF2 138 aa14.26□□□□□ -0.13
RNF43-205ENST00000581868 TRIM56Q9BRZ2 755 aaKnown RBP14.26□□□□□ -0.13
RNF43-205ENST00000581868 ELOVL4Q9GZR5 314 aa14.26□□□□□ -0.13
RNF43-205ENST00000581868 CNTN3Q9P232 1028 aa14.26□□□□□ -0.13
RNF43-205ENST00000581868 PPARGC1AQ9UBK2 798 aaKnown RBP14.26□□□□□ -0.13
RNF43-205ENST00000581868 ZC3H7BQ9UGR2 993 aaKnown RBP14.26□□□□□ -0.13
RNF43-205ENST00000581868 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.26□□□□□ -0.13
RNF43-205ENST00000581868 UTRNP46939 3433 aa14.26□□□□□ -0.13
RNF43-205ENST00000581868 H3BRJ5 948 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 APRTP07741 180 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 MRPS35P82673 323 aaKnown RBP14.25□□□□□ -0.13
RNF43-205ENST00000581868 MXRA7P84157 204 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 SLC34A1Q06495 639 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 BST1Q10588 318 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 KRT81Q14533 505 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 KRT72Q14CN4 511 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 ATF7IP2Q5U623 682 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 IER5Q5VY09 327 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 OR6B2Q6IFH4 312 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 ARID3BQ8IVW6 561 aaPredicted RBP14.25□□□□□ -0.13
RNF43-205ENST00000581868 FBXO27Q8NI29 283 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 TRAPPC12Q8WVT3 735 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 HEXIM2Q96MH2 286 aaKnown RBP14.25□□□□□ -0.13
RNF43-205ENST00000581868 FAM161BQ96MY7 647 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 ACAP3Q96P50 834 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 TTLL3Q9Y4R7 772 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 KRT37O76014 449 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 NFICP08651 508 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 SNRPAP09012 282 aaKnown RBP14.25□□□□□ -0.13
RNF43-205ENST00000581868 RARBP10826 455 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
RNF43-205ENST00000581868 RBL1P28749 1068 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 PRKG1Q13976 671 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 CHI3L2Q15782 390 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 WDR78Q5VTH9 848 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 LRRC74BQ6ZQY2 392 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 MICALL2Q8IY33 904 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 RXFP2Q8WXD0 754 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 PIWIL1Q96J94 861 aaKnown RBP14.25□□□□□ -0.13
RNF43-205ENST00000581868 DLGAP2Q9P1A6 1054 aa14.25□□□□□ -0.13
RNF43-205ENST00000581868 PRPSAP2O60256 369 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 CSDE1O75534 798 aaKnown RBP14.24□□□□□ -0.13
RNF43-205ENST00000581868 ITGB3P05106 788 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 KDSRQ06136 332 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 TRNP1Q6NT89 227 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 TREML1Q86YW5 311 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 C1orf127Q8N9H9 656 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 E2F7Q96AV8 911 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 MCRS1Q96EZ8 462 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 TMEM176AQ96HP8 235 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 RPF1Q9H9Y2 349 aaKnown RBP14.24□□□□□ -0.13
RNF43-205ENST00000581868 USP29Q9HBJ7 922 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 HOXC10Q9NYD6 342 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 PLLPQ9Y342 182 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 CHADO15335 359 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 HMGCRP04035 888 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 GPD1P21695 349 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 OSBPP22059 807 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 AMPD1P23109 780 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 ZNF143P52747 638 aaPredicted RBP14.24□□□□□ -0.13
RNF43-205ENST00000581868 IRX4P78413 519 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 TFDP2Q14188 446 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 CES4AQ5XG92 561 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 NUDCD3Q8IVD9 361 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 SEPT1Q8WYJ6 367 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 ARHGEF4Q9NR80 690 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 SMYD2Q9NRG4 433 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 PAK5Q9P286 719 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 MAD1L1Q9Y6D9 718 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 WASF2Q9Y6W5 498 aa14.24□□□□□ -0.13
RNF43-205ENST00000581868 B4GALT4O60513 344 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 SPAG6O75602 509 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 GPD2P43304 727 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 MRPS5P82675 430 aaKnown RBP14.23□□□□□ -0.13
RNF43-205ENST00000581868 MXD4Q14582 209 aaPredicted RBP14.23□□□□□ -0.13
RNF43-205ENST00000581868 HSF5Q4G112 596 aaPredicted RBP14.23□□□□□ -0.13
RNF43-205ENST00000581868 CMPK2Q5EBM0 449 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 MROH9Q5TGP6 573 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 PLD5Q8N7P1 536 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNF43-205ENST00000581868 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 DNERQ8NFT8 737 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 CCDC110Q8TBZ0 833 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 CLPTM1LQ96KA5 538 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 RNF157Q96PX1 679 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 BCO2Q9BYV7 579 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 PCMTD2Q9NV79 361 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 SIP14410 1827 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 PHIPQ8WWQ0 1821 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.23□□□□□ -0.13
RNF43-205ENST00000581868 ZBED1O96006 694 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 RGS7P49802 495 aa14.23□□□□□ -0.13
RNF43-205ENST00000581868 ALDH18A1P54886 795 aaKnown RBP14.23□□□□□ -0.13
RNF43-205ENST00000581868 AQP5P55064 265 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms