RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MYO15A	Q9UKN7	3530 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CFAP54	Q96N23	3096 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TLR5	O60602	858 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ADH1C	P00326	375 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CCDC192	P0DO97	292 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ATP5C1	P36542	298 aa	Known RBP	13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GALK1	P51570	392 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	KIF11	P52732	1056 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ISM2	Q6H9L7	571 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	FSTL4	Q6MZW2	842 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TRIM59	Q8IWR1	403 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ARHGAP18	Q8N392	663 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CAMKK1	Q8N5S9	505 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GPR161	Q8N6U8	529 aa	Known RBP	13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	RUBCN	Q92622	972 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TATDN2	Q93075	761 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	JAKMIP2	Q96AA8	810 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ZFR	Q96KR1	1074 aa	Known RBP	13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	NACA2	Q9H009	215 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	LINC00597	Q9H2U6	94 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.28	□□□□□ -0.28	2e-6	■■■■□ 21
CDK5RAP3-222	ENST00000581708	RBM12	Q9NTZ6	932 aa	Known RBP	13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CFAP97	Q9P2B7	532 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	RWDD2A	Q9UIY3	292 aa		13.28	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SPTBN4	Q9H254	2564 aa		13.27	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PAEP	P09466	180 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	VDR	P11473	427 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ACO1	P21399	889 aa	Known RBP	13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SATB1	Q01826	763 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GCNT1	Q02742	428 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	STIL	Q15468	1287 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SGO2	Q562F6	1265 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HTR3D	Q70Z44	454 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LONP2	Q86WA8	852 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MLKL	Q8NB16	471 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SUMF1	Q8NBK3	374 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SECISBP2L	Q93073	1101 aa	Known RBP	13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ACD	Q96AP0	544 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	FAM81B	Q96LP2	452 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	NT5C1B	Q96P26	610 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ARID3A	Q99856	593 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CCSER2	Q9H7U1	834 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SMPD4	Q9NXE4	827 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HESX1	Q9UBX0	185 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CTNND2	Q9UQB3	1225 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SH3BP1	Q9Y3L3	701 aa		13.27	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		A0A0A0MRY4	1105 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		K7ESF4	209 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	BIN1	O00499	593 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CYP17A1	P05093	508 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SETSIP	P0DME0	302 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PLA2G4A	P47712	749 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	BCAT1	P54687	386 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	DHCR24	Q15392	516 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HSF5	Q4G112	596 aa	Predicted RBP	13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ZNF394	Q53GI3	561 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RAB41	Q5JT25	222 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708		Q6ZS52	159 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SYT13	Q7L8C5	426 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	UBR7	Q8N806	425 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TTC16	Q8NEE8	873 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.26	□□□□□ -0.29	1e-6	■□□□□ 8
CDK5RAP3-222	ENST00000581708	DNMT3L	Q9UJW3	386 aa		13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	XPO1	O14980	1071 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CYP26A1	O43174	497 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	HOXC11	O43248	304 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	EGF	P01133	1207 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	AFP	P02771	609 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RALA	P11233	206 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ADH5	P11766	374 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RARG	P13631	454 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	COG7	P83436	770 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GAD2	Q05329	585 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	BST2	Q10589	180 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	KCNH2	Q12809	1159 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GAB4	Q2WGN9	574 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	PM20D1	Q6GTS8	502 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RHBDF2	Q6PJF5	856 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	TSSK4	Q6SA08	328 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	NUDT18	Q6ZVK8	323 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ENOSF1	Q7L5Y1	443 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GPRIN1	Q7Z2K8	1008 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	WDR5B	Q86VZ2	330 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SCML4	Q8N228	414 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	EHBP1	Q8NDI1	1231 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LMO3	Q8TAP4	145 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	KCNV2	Q8TDN2	545 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	KLF16	Q9BXK1	252 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SRRT	Q9BXP5	876 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	LSM7	Q9UK45	103 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RAB23	Q9ULC3	237 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	SLC8A2	Q9UPR5	921 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ZNF510	Q9Y2H8	683 aa		13.25	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	GPR179	Q6PRD1	2367 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	RNF40	O75150	1001 aa		13.24	□□□□□ -0.29
CDK5RAP3-222	ENST00000581708	ZBED1	O96006	694 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms