RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PPM1KQ8N3J5 372 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 UBR7Q8N806 425 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 MLKLQ8NB16 471 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 ANKRD52Q8NB46 1076 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 LMO3Q8TAP4 145 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 ATRIPQ8WXE1 791 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 NELL1Q92832 810 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 FAM126AQ9BYI3 521 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-220ENST00000581707 UBXN6Q9BZV1 441 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 ZSCAN32Q9NX65 697 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 PCDHGA2Q9Y5H1 932 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 ATG2BQ96BY7 2078 aa20.56■□□□□ 0.88
SREBF1-220ENST00000581707 EGFP01133 1207 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 AFPP02771 609 aaKnown RBP20.55■□□□□ 0.88
SREBF1-220ENST00000581707 DRD1P21728 446 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 NRLP54845 237 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 CCDC186Q7Z3E2 898 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 ZBTB44Q8NCP5 570 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 EHBP1Q8NDI1 1231 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 CD101Q93033 1021 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 CYLDQ9NQC7 956 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 OSER1Q9NX31 292 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 TBC1D14Q9P2M4 693 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 KIAA1257Q9ULG3 409 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 USP3Q9Y6I4 520 aa20.55■□□□□ 0.88
SREBF1-220ENST00000581707 MYOFQ9NZM1 2061 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 A0A1W2PQH9 124 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 TBX18O95935 607 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 LMNAP02545 664 aaKnown RBP20.54■□□□□ 0.88
SREBF1-220ENST00000581707 CYP17A1P05093 508 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 VDRP11473 427 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 TDGF1P13385 188 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 CD19P15391 556 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 ATP5C1P36542 298 aaKnown RBP20.54■□□□□ 0.88
SREBF1-220ENST00000581707 GOLGA7BQ2TAP0 167 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 PIGZQ86VD9 579 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 CREBRFQ8IUR6 639 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 MED15Q96RN5 788 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 NMUR1Q9HB89 426 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 HESX1Q9UBX0 185 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 TSPAN16Q9UKR8 245 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 SH3BP1Q9Y3L3 701 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 PCDHB4Q9Y5E5 795 aa20.54■□□□□ 0.88
SREBF1-220ENST00000581707 RARGP13631 454 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 PSEN1P49768 467 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 DHCR24Q15392 516 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 TMEM270Q6UE05 265 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 RRAGAQ7L523 313 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 SCD5Q86SK9 330 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 TTC30AQ86WT1 665 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 KAT5Q92993 513 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 OTUB2Q96DC9 234 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 NUP62CLQ9H1M0 184 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 LMBRD1Q9NUN5 540 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.53■□□□□ 0.88
SREBF1-220ENST00000581707 NAGPAQ9UK23 515 aa20.53■□□□□ 0.88
SREBF1-220ENST00000581707 EP300Q09472 2414 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-220ENST00000581707 PAPSS2O95340 614 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-220ENST00000581707 PAEPP09466 180 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 IRF1P10914 325 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 BCAT1P54687 386 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 PDE4CQ08493 712 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 FBXO43Q4G163 708 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 RAB41Q5JT25 222 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 C10orf120Q5SQS8 335 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 KLHDC10Q6PID8 442 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 RHBDF2Q6PJF5 856 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 ARHGEF19Q8IW93 802 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 CNOT6LQ96LI5 555 aaKnown RBP20.52■□□□□ 0.88
SREBF1-220ENST00000581707 KLF16Q9BXK1 252 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-220ENST00000581707 INTS2Q9H0H0 1204 aaKnown RBP20.52■□□□□ 0.88
SREBF1-220ENST00000581707 C2orf42Q9NWW7 574 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 DNMT3LQ9UJW3 386 aa20.52■□□□□ 0.88
SREBF1-220ENST00000581707 O00370 1275 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 XPO1O14980 1071 aaKnown RBP20.51■□□□□ 0.87
SREBF1-220ENST00000581707 LILRB5O75023 590 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 ATG13O75143 517 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 RNF40O75150 1001 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 ADH1CP00326 375 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 RALAP11233 206 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 OPRD1P41143 372 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 GCNT1Q02742 428 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 GOLGA8FQ08AF8 430 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 GOLGA8DPQ0D2H9 430 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 BST2Q10589 180 aaKnown RBP20.51■□□□□ 0.87
SREBF1-220ENST00000581707 TPD52L1Q16890 204 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-220ENST00000581707 GAB4Q2WGN9 574 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 PKN3Q6P5Z2 889 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 TADA2BQ86TJ2 420 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 BBS7Q8IWZ6 715 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 ZNF276Q8N554 614 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 UBA3Q8TBC4 463 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 WBP2Q969T9 261 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 CLIC5Q9NZA1 410 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 NUDT5Q9UKK9 219 aa20.51■□□□□ 0.87
SREBF1-220ENST00000581707 K7ESF4 209 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 RNF225M0QZC1 329 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-220ENST00000581707 TULP2O00295 520 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 ADH5P11766 374 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 PLA2G4AP47712 749 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms