RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 SF3A2Q15428 464 aaKnown RBP9.34□□□□□ -0.91
NUP85-217ENST00000581335 CCDC6Q16204 474 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 SNRNP35Q16560 246 aaKnown RBP9.34□□□□□ -0.91
NUP85-217ENST00000581335 AASDHQ4L235 1098 aaPredicted RBP9.34□□□□□ -0.91
NUP85-217ENST00000581335 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 SHC4Q6S5L8 630 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 HS2ST1Q7LGA3 356 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 KIAA1958Q8N8K9 716 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 C12orf50Q8NA57 414 aaPredicted RBP9.34□□□□□ -0.91
NUP85-217ENST00000581335 XXYLT1Q8NBI6 393 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 OR6B3Q8NGW1 331 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 CCDC26Q8TAB7 109 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
NUP85-217ENST00000581335 C8orf48Q96LL4 319 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 HHIPQ96QV1 700 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 FNBP1Q96RU3 617 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 CGRRF1Q99675 332 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 AGPAT3Q9NRZ7 376 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 EBF1Q9UH73 591 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 PCDHGA5Q9Y5G8 931 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 CEP250Q9BV73 2442 aa9.34□□□□□ -0.91
NUP85-217ENST00000581335 UBE4BO95155 1302 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 ZNF840PA6NDX5 716 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 TM4SF5O14894 197 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 APBB3O95704 486 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 STAU1O95793 577 aaKnown RBP9.33□□□□□ -0.92
NUP85-217ENST00000581335 PTPN1P18031 435 aaKnown RBP9.33□□□□□ -0.92
NUP85-217ENST00000581335 OPRD1P41143 372 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 TNNC1P63316 161 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 SLC7A9P82251 487 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 EHHADHQ08426 723 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 DMC1Q14565 340 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 WDR72Q3MJ13 1102 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 PLK5Q496M5 336 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 MDH1BQ5I0G3 518 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
NUP85-217ENST00000581335 IL31Q6EBC2 164 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 NELFCDQ8IXH7 590 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 ADGRG2Q8IZP9 1017 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 SCFD1Q8WVM8 642 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 ACDQ96AP0 544 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 CCDC127Q96BQ5 260 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
NUP85-217ENST00000581335 RNF38Q9H0F5 515 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 DUSP15Q9H1R2 295 aaPredicted RBP9.33□□□□□ -0.92
NUP85-217ENST00000581335 MAGEF1Q9HAY2 307 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
NUP85-217ENST00000581335 SPAG17Q6Q759 2223 aa9.33□□□□□ -0.92
NUP85-217ENST00000581335 PVALEFA0A1B0GWK0 134 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 A8MXQ7 604 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 F8VP50 259 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 K7EQS6 105 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 POLR2DO15514 142 aaKnown RBP9.32□□□□□ -0.92
NUP85-217ENST00000581335 RHOBTB1O94844 696 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 OLFM2O95897 454 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 CASP1P29466 404 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 ATICP31939 592 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 MPLP40238 635 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 CYP2J2P51589 502 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 MYL6P60660 151 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 TAF10Q12962 218 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 TRPC3Q13507 836 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 BMT2Q1RMZ1 405 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 GAB4Q2WGN9 574 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 VASH1Q7L8A9 365 aaPredicted RBP9.32□□□□□ -0.92
NUP85-217ENST00000581335 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 C12orf56Q8IXR9 622 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 USP33Q8TEY7 942 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 SYAP1Q96A49 352 aaPredicted RBP9.32□□□□□ -0.92
NUP85-217ENST00000581335 SLITRK1Q96PX8 696 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 B3GNT5Q9BYG0 378 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 BACH2Q9BYV9 841 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 ELOVL4Q9GZR5 314 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 DPEP3Q9H4B8 488 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 SLC39A2Q9NP94 309 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 VPS45Q9NRW7 570 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 RXFP3Q9NSD7 469 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
NUP85-217ENST00000581335 CPQQ9Y646 472 aa9.32□□□□□ -0.92
NUP85-217ENST00000581335 CLDN5O00501 218 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 SLC9A3R1O14745 358 aaPredicted RBP9.31□□□□□ -0.92
NUP85-217ENST00000581335 DCLK1O15075 740 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 EXOC3O60645 756 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 LILRA1O75019 489 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 PHACTR2O75167 634 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 OAS1P00973 400 aaKnown RBP9.31□□□□□ -0.92
NUP85-217ENST00000581335 DGKEP52429 567 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 CACNA2D1P54289 1103 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 MRPS21P82921 87 aaKnown RBP9.31□□□□□ -0.92
NUP85-217ENST00000581335 CUL4BQ13620 913 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 DHCR24Q15392 516 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 ELF2Q15723 593 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 KNOP1Q1ED39 458 aaKnown RBP9.31□□□□□ -0.92
NUP85-217ENST00000581335 USP39Q53GS9 565 aaKnown RBP9.31□□□□□ -0.92
NUP85-217ENST00000581335 C2orf27AQ580R0 203 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 STPG1Q5TH74 334 aa9.31□□□□□ -0.92
NUP85-217ENST00000581335 DDX42Q86XP3 938 aaKnown RBP eCLIP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms