RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 SLC2A13Q96QE2 648 aa8.36□□□□□ -1.07
KPNB1-210ENST00000580573 NCAPGQ9BPX3 1015 aa8.36□□□□□ -1.07
KPNB1-210ENST00000580573 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.07
KPNB1-210ENST00000580573 TTPALQ9BTX7 342 aa8.36□□□□□ -1.07
KPNB1-210ENST00000580573 HTATIP2Q9BUP3 242 aa8.36□□□□□ -1.07
KPNB1-210ENST00000580573 DDX23Q9BUQ8 820 aaKnown RBP8.36□□□□□ -1.07
KPNB1-210ENST00000580573 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
KPNB1-210ENST00000580573 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
KPNB1-210ENST00000580573 PRKAG2Q9UGJ0 569 aa8.36□□□□□ -1.07
KPNB1-210ENST00000580573 DOCK4Q8N1I0 1966 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CTAGE15A4D2H0 777 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 MTMR11A4FU01 709 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 ZNF487B1APH4 448 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 NT5C1B-RDH14C9J2C7 533 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 GOLGA8SH3BPF8 625 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 PGRMC1O00264 195 aaKnown RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 SART1O43290 800 aaKnown RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 SPOPO43791 374 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 FYNP06241 537 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CTAGE8P0CG41 777 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 TCF4P15884 667 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 BDNFP23560 247 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 MATKP42679 507 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 TKTL1P51854 596 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 RWDD2BP57060 319 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 MAP3K7CLP57077 242 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 KLF1Q13351 362 aaPredicted RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 EIF4EBP2Q13542 120 aaPredicted RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 BTG3Q14201 252 aaPredicted RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CCDC14Q49A88 953 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CTXN3Q4LDR2 81 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 EFHC1Q5JVL4 640 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 OR6B2Q6IFH4 312 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CC2D1AQ6P1N0 951 aaPredicted RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 STRADAQ7RTN6 431 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 OTOP2Q7RTS6 562 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 TAS1R1Q7RTX1 841 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 TMCO2Q7Z6W1 182 aaPredicted RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 PHLDB2Q86SQ0 1253 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CTAGE6Q86UF2 777 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CTAGE4Q8IX94 777 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 C7orf61Q8IZ16 206 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 MMGT1Q8N4V1 131 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 EMC1Q8N766 993 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 SPATA4Q8NEY3 305 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 SPPL2BQ8TCT7 592 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 CLEC4CQ8WTT0 213 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 RXFP2Q8WXD0 754 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 HLA-CQ95604 372 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 PGAP3Q96FM1 320 aaPredicted RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 KCNK16Q96T55 309 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 NPY6RQ99463 290 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 MED10Q9BTT4 135 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 RHOBTB2Q9BYZ6 727 aa8.35□□□□□ -1.07
KPNB1-210ENST00000580573 RANBP2P49792 3224 aaKnown RBP8.35□□□□□ -1.07
KPNB1-210ENST00000580573 C3orf70A6NLC5 250 aaPredicted RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 TMEM110-MUSTN1A8MSY1 372 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 CCDC188H7C350 402 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 FSCN2O14926 492 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 ABLIM3O94929 683 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 ZBED1O96006 694 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 IGLV3-25P01717 112 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 KRT7P08729 469 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 OR4Q2P0C623 313 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 PYGMP11217 842 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 PSMA2P25787 234 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 IL1R2P27930 398 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SDC4P31431 198 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 NOS2P35228 1153 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 NDUFV1P49821 464 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 ARSEP51690 589 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 HDAC4P56524 1084 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 COPS2P61201 443 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 YWHAZP63104 245 aaKnown RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 ROR1Q01973 937 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SIX1Q15475 284 aaPredicted RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 TAF5Q15542 800 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 PSMD5Q16401 504 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 CYP1B1Q16678 543 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 PTPROQ16827 1216 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SLC25A52Q3SY17 297 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SLC39A12Q504Y0 691 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 DAB2IPQ5VWQ8 1189 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SPATA2LQ8IUW3 424 aaPredicted RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 HERC6Q8IVU3 1022 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 ZDHHC14Q8IZN3 488 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 NOA1Q8NC60 698 aaKnown RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 CMASQ8NFW8 434 aaPredicted RBP8.34□□□□□ -1.07
KPNB1-210ENST00000580573 TEKT4Q8WW24 435 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 GOLGA1Q92805 767 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 TMEM169Q96HH4 297 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 MS4A14Q96JA4 679 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 CAPZA3Q96KX2 299 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 SPATA17Q96L03 361 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 B3GALT6Q96L58 329 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 TBCBQ99426 244 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 PSMB7Q99436 277 aa8.34□□□□□ -1.07
KPNB1-210ENST00000580573 NAP1L3Q99457 506 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms