RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TLN1Q9Y490 2541 aaKnown RBP15.05■□□□□ -0
CSNK1D-213ENST00000580446 TMEM131Q92545 1883 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 IRF1P10914 325 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 MBL2P11226 248 aaPredicted RBP15.04■□□□□ -0
CSNK1D-213ENST00000580446 CTSKP43235 329 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 GABREP78334 506 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 INSM1Q01101 510 aaPredicted RBP15.04■□□□□ -0
CSNK1D-213ENST00000580446 TLE1Q04724 770 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 RAD51AP2Q09MP3 1159 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 SMARCB1Q12824 385 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 TEAD4Q15561 434 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 INAVAQ3KP66 663 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 TSGA10IPQ3SY00 556 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 SCARA3Q6AZY7 606 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 BHMTQ93088 406 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 RUSC1Q9BVN2 902 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 TRPM5Q9NZQ8 1165 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 ITPR3Q14573 2671 aa15.04■□□□□ -0
CSNK1D-213ENST00000580446 BLACEA4D250 179 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 ZNF840PA6NDX5 716 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 HOXC11O43248 304 aaPredicted RBP15.03■□□□□ -0
CSNK1D-213ENST00000580446 SUV39H1O43463 412 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 XPOTO43592 962 aaKnown RBP15.03■□□□□ -0
CSNK1D-213ENST00000580446 HMGB1P09429 215 aaKnown RBP15.03■□□□□ -0
CSNK1D-213ENST00000580446 FOSBP53539 338 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 IFRD2Q12894 506 aaPredicted RBP15.03■□□□□ -0
CSNK1D-213ENST00000580446 STRN3Q13033 797 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 MAPK7Q13164 816 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 KRT32Q14532 448 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 SHBQ15464 509 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 NFE2Q16621 373 aaPredicted RBP15.03■□□□□ -0
CSNK1D-213ENST00000580446 BLOC1S2Q6QNY1 142 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 ADAT2Q7Z6V5 191 aaKnown RBP15.03■□□□□ -0
CSNK1D-213ENST00000580446 OSTM1Q86WC4 334 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 SCFD1Q8WVM8 642 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 BICD1Q96G01 975 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 VCPIP1Q96JH7 1222 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 FAM84AQ96KN4 292 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 STARD13Q9Y3M8 1113 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 PCDHB6Q9Y5E3 794 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 STON1Q9Y6Q2 735 aa15.03■□□□□ -0
CSNK1D-213ENST00000580446 A0A1B0GTQ1 180 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 NEDD8-MDP1E9PL57 170 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 K7ENP7 123 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 LAD1O00515 517 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 ATP2C2O75185 946 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 FSBPO95073 299 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 AFPP02771 609 aaKnown RBP15.02■□□□□ -0
CSNK1D-213ENST00000580446 ITGAVP06756 1048 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 RPS6KB1P23443 525 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 ACSL1P33121 698 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 TAF6P49848 677 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 TMEM132DQ14C87 1099 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 LINC00303Q3SY05 128 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 INTS6LQ5JSJ4 861 aaKnown RBP15.02■□□□□ -0
CSNK1D-213ENST00000580446 INO80CQ6PI98 192 aaPredicted RBP15.02■□□□□ -0
CSNK1D-213ENST00000580446 TMPRSS6Q8IU80 811 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 SPATA2LQ8IUW3 424 aaPredicted RBP15.02■□□□□ -0
CSNK1D-213ENST00000580446 PDCL2Q8N4E4 241 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 DCBLD1Q8N8Z6 715 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 PKMYT1Q99640 499 aa15.02■□□□□ -0
CSNK1D-213ENST00000580446 DDX43Q9NXZ2 648 aaKnown RBP15.02■□□□□ -0
CSNK1D-213ENST00000580446 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.02■□□□□ -0
CSNK1D-213ENST00000580446 MYLKQ15746 1914 aa15.02□□□□□ -0.01
CSNK1D-213ENST00000580446 FAM189A1O60320 539 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 FAM87AP0C7U9 286 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 ABCB4P21439 1286 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 GRIA4P48058 902 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 PDE6CP51160 858 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 IGFBP7Q16270 282 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 SNRNP27Q8WVK2 155 aaKnown RBP15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 SIPA1Q96FS4 1042 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 ZNF578Q96N58 590 aaPredicted RBP15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 SPHK2Q9NRA0 654 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 STARD5Q9NSY2 213 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 L1RE1Q9UN81 338 aa15.01□□□□□ -0.01
CSNK1D-213ENST00000580446 C2CD3Q4AC94 2353 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 ITPR2Q14571 2701 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 E9PMD0 336 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 OLFM2O95897 454 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 MT-CO3P00414 261 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 C1SP09871 688 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
CSNK1D-213ENST00000580446 RPA1P27694 616 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 MCM7P33993 719 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 CCT6AP40227 531 aaKnown RBP15□□□□□ -0.01
CSNK1D-213ENST00000580446 PSMC1P62191 440 aaKnown RBP15□□□□□ -0.01
CSNK1D-213ENST00000580446 STARD3Q14849 445 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 TPGS1Q6ZTW0 290 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 KRI1Q8N9T8 703 aaKnown RBP15□□□□□ -0.01
CSNK1D-213ENST00000580446 TMEM161BQ8NDZ6 487 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 LEO1Q8WVC0 666 aaPredicted RBP15□□□□□ -0.01
CSNK1D-213ENST00000580446 PRCCQ92733 491 aaPredicted RBP15□□□□□ -0.01
CSNK1D-213ENST00000580446 EXTL1Q92935 676 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 BIRC7Q96CA5 298 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 PSMG3-AS1Q96PY0 264 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 NUP58Q9BVL2 599 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 ABCB6Q9NP58 842 aa15□□□□□ -0.01
CSNK1D-213ENST00000580446 DDX19AQ9NUU7 478 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms