RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 SNRNP35Q16560 246 aaKnown RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 LONRF1Q17RB8 773 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 TSNAXIP1Q2TAA8 658 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 WASHC2DQ5SRD0 308 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 ZBTB37Q5TC79 503 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 LIN9Q5TKA1 542 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 STRIP1Q5VSL9 837 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 DRICH1Q6PGQ1 229 aaPredicted RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 FAM196AQ6ZSG2 479 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 ARMCX6Q7L4S7 300 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 PCGF5Q86SE9 256 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 PALB2Q86YC2 1186 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 SIAH1Q8IUQ4 282 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 ARHGEF19Q8IW93 802 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 LMNTD2Q8IXW0 634 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 PPM1KQ8N3J5 372 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 MFSD4AQ8N468 514 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 MFSD2AQ8NA29 543 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 FBXO15Q8NCQ5 510 aaPredicted RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 EXD1Q8NHP7 514 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 AGAP11Q8TF27 550 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 STAMBPL1Q96FJ0 436 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 RBM41Q96IZ5 413 aaKnown RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 LRRC37BQ96QE4 947 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 SMC6Q96SB8 1091 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 PCDHB18PQ96TA0 734 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 P2RX7Q99572 595 aaKnown RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 MXRA8Q9BRK3 442 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 FRMD8P1Q9BZ68 369 aaPredicted RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 DCLK3Q9C098 648 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 TMEM117Q9H0C3 514 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 UNC45AQ9H3U1 944 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 ANKEF1Q9NU02 776 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 TBC1D22BQ9NU19 505 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 NINJ2Q9NZG7 142 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 TMOD2Q9NZR1 351 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 ANAPC7Q9UJX3 599 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 CORO1CQ9ULV4 474 aaPredicted RBP5.59□□□□□ -1.51
CDH8-206ENST00000580044 SHOC2Q9UQ13 582 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 PCDHB2Q9Y5E7 798 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 SCN4AP35499 1836 aa5.59□□□□□ -1.51
CDH8-206ENST00000580044 EXOC1LA0A1B0GW35 172 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 PRAMEF27A3QJZ7 478 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 RASA4BC9J798 803 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ANKRD63C9JTQ0 380 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 POLRMTO00411 1230 aaKnown RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 TRAFD1O14545 582 aaPredicted RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 PPP1R12AO14974 1030 aaPredicted RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 CLDN3O15551 220 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 RASA4O43374 803 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ZBED4O75132 1171 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 PROSCO94903 275 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 TJP3O95049 919 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 KRT16P08779 473 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 TROVE2P10155 538 aaKnown RBP eCLIP5.58□□□□□ -1.52
CDH8-206ENST00000580044 UNGP13051 313 aaPredicted RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 GARTP22102 1010 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 PTPN7P35236 360 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 GDNFP39905 211 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 GCLMP48507 274 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 RBM5P52756 815 aaKnown RBP eCLIP5.58□□□□□ -1.52
CDH8-206ENST00000580044 PSMC5P62195 406 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 KCNJ2P63252 427 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 DLG4P78352 724 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 GHRHRQ02643 423 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 TAP1Q03518 808 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ZNF252P-AS1Q0IIN9 211 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 MESP2Q0VG99 397 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 DMP1Q13316 513 aaPredicted RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 MORF4L2Q15014 288 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 PDK4Q16654 411 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 EAPPQ56P03 285 aaPredicted RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 ANKRD20A2Q5SQ80 823 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ANKRD20A1Q5TYW2 823 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 LRRC38Q5VT99 294 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ANKRD20A3Q5VUR7 823 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 IZUMO3Q5VZ72 239 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 PCNX4Q63HM2 1172 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ALG1LQ6GMV1 187 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 XRRA1Q6P2D8 792 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 CENPUQ71F23 418 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 BZW1Q7L1Q6 419 aaKnown RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 GSTA5Q7RTV2 222 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 TMC7Q7Z402 723 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 HAUS6Q7Z4H7 955 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ANKS1BQ7Z6G8 1248 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 TRABD2AQ86V40 505 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 SLC47A2Q86VL8 602 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 VSIG1Q86XK7 387 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 C4orf19Q8IY42 314 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 SRRM1Q8IYB3 904 aaKnown RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 LRRC56Q8IYG6 542 aaPredicted RBP5.58□□□□□ -1.52
CDH8-206ENST00000580044 RCOR2Q8IZ40 523 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 MCOLN2Q8IZK6 566 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ARHGAP24Q8N264 748 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 FITM2Q8N6M3 262 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 ANKRD42Q8N9B4 389 aa5.58□□□□□ -1.52
CDH8-206ENST00000580044 CYP2W1Q8TAV3 490 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms