RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 KLRC4O43908 158 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 EXOC3O60645 756 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 TULP3O75386 442 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 BEST1O76090 585 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 DHPSP49366 369 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 AP3M2P53677 418 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 SLC5A3P53794 718 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 IFRD2Q12894 506 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 CUL4BQ13620 913 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 NCOA4Q13772 614 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 PEAR1Q5VY43 1037 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 HTR3DQ70Z44 454 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 TTC30AQ86WT1 665 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 TMEM25Q86YD3 366 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 SYT12Q8IV01 421 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 BBS7Q8IWZ6 715 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 TMEFF1Q8IYR6 380 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 PIGKQ92643 395 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 ELMO3Q96BJ8 720 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 SMOQ99835 787 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 CSNK1G1Q9HCP0 422 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 ZDHHC4Q9NPG8 344 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 SPHK2Q9NRA0 654 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 GMIPQ9P107 970 aa11.29□□□□□ -0.6
CSNK1D-210ENST00000579308 SPEGQ15772 3267 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 A0A1W2PQF6 199 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 TRIM24O15164 1050 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 MAP3K13O43283 966 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 PHACTR2O75167 634 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 TBX18O95935 607 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 CENPBP07199 599 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 KDSRQ06136 332 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 LMAN2Q12907 356 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 STK4Q13043 487 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 BYSLQ13895 437 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 ZNF699Q32M78 642 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 TRIM61Q5EBN2 209 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 RESP18Q5W5W9 173 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 SLC23A3Q6PIS1 610 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 NAT16Q8N8M0 369 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 HMGB4Q8WW32 186 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 SMARCD1Q96GM5 515 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 TNIP3Q96KP6 325 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 MED10Q9BTT4 135 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 KLF16Q9BXK1 252 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 KCTD10Q9H3F6 313 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 DEC1Q9P2X7 70 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 PILRBQ9UKJ0 227 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 SH3BP1Q9Y3L3 701 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 ZNF638Q14966 1978 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 ATP8B3O60423 1300 aa11.28□□□□□ -0.6
CSNK1D-210ENST00000579308 LAMA5O15230 3695 aa11.27□□□□□ -0.6
CSNK1D-210ENST00000579308 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 HHLA1C9JL84 531 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 TLR5O60602 858 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 AP1G2O75843 785 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 TOP3BO95985 862 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 RPN1P04843 607 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 GABRG2P18507 467 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 ITPKAP23677 461 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 HOXD12P35452 270 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 AFMP43652 599 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 DLG4P78352 724 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 ZNF252P-AS1Q0IIN9 211 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 BIRC3Q13489 604 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 ZACNQ401N2 412 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 PREPLQ4J6C6 727 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 C1orf220Q5T0J3 134 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 BTBD8Q5XKL5 378 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 UNC93AQ86WB7 457 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 GRAMD1CQ8IYS0 662 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 ZNF513Q8N8E2 541 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 TERB1Q8NA31 727 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 KIAA0895Q8NCT3 520 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 KRT82Q9NSB4 513 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 OSER1Q9NX31 292 aa11.27□□□□□ -0.61
CSNK1D-210ENST00000579308 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.618e-7■■□□□ 14.4
CSNK1D-210ENST00000579308 IKBKBO14920 756 aa11.26□□□□□ -0.61
CSNK1D-210ENST00000579308 CACNG3O60359 315 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms