RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 PHACTR2O75167 634 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 ZDHHC11BP0C7U3 371 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 HOXD12P35452 270 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 SLC5A3P53794 718 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 PEAR1Q5VY43 1037 aaPredicted RBP20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 SLC23A3Q6PIS1 610 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 NUDT18Q6ZVK8 323 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 PAQR9Q6ZVX9 377 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 ARMCX6Q7L4S7 300 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 PGBD3Q8N328 593 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 FRMD1Q8N878 549 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 KDF1Q8NAX2 398 aaPredicted RBP20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 SCAMP5Q8TAC9 235 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 TNIP3Q96KP6 325 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 MED10Q9BTT4 135 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 SMYD3Q9H7B4 428 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 CCSER2Q9H7U1 834 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 ZDHHC4Q9NPG8 344 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 SPHK2Q9NRA0 654 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 TMEM74BQ9NUR3 256 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 DEC1Q9P2X7 70 aa20.36■□□□□ 0.85
CDKN2A-213ENST00000579122 PLXND1Q9Y4D7 1925 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 TNRC6BQ9UPQ9 1833 aaKnown RBP20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 CUTAO60888 179 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 TULP3O75386 442 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 AP3M2P53677 418 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 CDH8P55286 799 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 ZNF699Q32M78 642 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 LYSMD4Q5XG99 296 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 SHC4Q6S5L8 630 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 BBS7Q8IWZ6 715 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 ZNF513Q8N8E2 541 aaPredicted RBP20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 NAT16Q8N8M0 369 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 DEFB124Q8NES8 71 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 SMARCD1Q96GM5 515 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 ZNF396Q96N95 335 aaPredicted RBP20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 ADAM33Q9BZ11 813 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 PILRBQ9UKJ0 227 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 SPEGQ15772 3267 aa20.35■□□□□ 0.85
CDKN2A-213ENST00000579122 EXOC3O60645 756 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 YEATS4O95619 227 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 ENGP17813 658 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 ZNF667Q5HYK9 610 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 TERB1Q8NA31 727 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 TMEM121BQ9BXQ6 578 aaPredicted RBP20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 SLC32A1Q9H598 525 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 GMIPQ9P107 970 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 TFIP11Q9UBB9 837 aaKnown RBP20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 ZMIZ1Q9ULJ6 1067 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 STARD13Q9Y3M8 1113 aa20.34■□□□□ 0.85
CDKN2A-213ENST00000579122 MYOFQ9NZM1 2061 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 PVALEFA0A1B0GWK0 134 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 TMEM8BA6NDV4 472 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 AP5Z1O43299 807 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 AP1G2O75843 785 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 SPINK2P20155 84 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 MAPK8P45983 427 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 CASP4P49662 377 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 CLDN10P78369 228 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 BIRC3Q13489 604 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 KNOP1Q1ED39 458 aaKnown RBP20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 ANO4Q32M45 955 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 C10orf76Q5T2E6 689 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 SLC36A4Q6YBV0 504 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 TMEM25Q86YD3 366 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 FUKQ8N0W3 1084 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 CEP76Q8TAP6 659 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 GOLGA5Q8TBA6 731 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 PLEKHO2Q8TD55 490 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 NACA2Q9H009 215 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 SLC39A2Q9NP94 309 aa20.33■□□□□ 0.85
CDKN2A-213ENST00000579122 AKAP13Q12802 2813 aa20.33■□□□□ 0.84
CDKN2A-213ENST00000579122 LRRIQ3A6PVS8 624 aaPredicted RBP20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 UPK3BL1B0FP48 263 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 UPK3BL2E5RIL1 263 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 POLR2DO15514 142 aaKnown RBP20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 TOP3BO95985 862 aaKnown RBP20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 GABRG2P18507 467 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 ITPKAP23677 461 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 NTSR1P30989 418 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 NCOA4Q13772 614 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 SCARA5Q6ZMJ2 495 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 HTR3DQ70Z44 454 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 PARD3BQ8TEW8 1205 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 WBP2Q969T9 261 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 SCNM1Q9BWG6 230 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 SDCBP2Q9H190 292 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 BLZF1Q9H2G9 400 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 KRT82Q9NSB4 513 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 HCN2Q9UL51 889 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 SLC6A14Q9UN76 642 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 IGF2RP11717 2491 aa20.32■□□□□ 0.84
CDKN2A-213ENST00000579122 ATXN2Q99700 1313 aaKnown RBP20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 TLR5O60602 858 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 CLSTN1O94985 981 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 C4BPAP04003 597 aaKnown RBP20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 IRF1P10914 325 aa20.31■□□□□ 0.84
CDKN2A-213ENST00000579122 P4HA1P13674 534 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms