RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 GABRG3Q99928 467 aa9.27□□□□□ -0.93
BRIP1-204ENST00000579028 IKZF4Q9H2S9 585 aa9.27□□□□□ -0.93
BRIP1-204ENST00000579028 ZHX3Q9H4I2 956 aa9.27□□□□□ -0.93
BRIP1-204ENST00000579028 CD93Q9NPY3 652 aa9.27□□□□□ -0.93
BRIP1-204ENST00000579028 SIX4Q9UIU6 781 aa9.27□□□□□ -0.93
BRIP1-204ENST00000579028 LIMCH1Q9UPQ0 1083 aa9.27□□□□□ -0.93
BRIP1-204ENST00000579028 SHROOM3Q8TF72 1996 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 TRABD2BA6NFA1 517 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 F8VP50 259 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 LDHAP00338 332 aaKnown RBP9.26□□□□□ -0.93
BRIP1-204ENST00000579028 ABL1P00519 1130 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 PRB1P04280 392 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 KRT18P05783 430 aaKnown RBP9.26□□□□□ -0.93
BRIP1-204ENST00000579028 MAOBP27338 520 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 CYP4F3Q08477 520 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 DHX8Q14562 1220 aaKnown RBP9.26□□□□□ -0.93
BRIP1-204ENST00000579028 MCM6Q14566 821 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 RILPL1Q5EBL4 403 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
BRIP1-204ENST00000579028 SDE2Q6IQ49 451 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 ZNF720Q7Z2F6 126 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 METTL3Q86U44 580 aaKnown RBP9.26□□□□□ -0.93
BRIP1-204ENST00000579028 GALNT15Q8N3T1 639 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 ZSWIM2Q8NEG5 633 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 MYCBPAPQ8TBZ2 947 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 SETD7Q8WTS6 366 aaKnown RBP9.26□□□□□ -0.93
BRIP1-204ENST00000579028 RAD54LQ92698 747 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 CALML4Q96GE6 196 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 MRGPRX1Q96LB2 322 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 AK8Q96MA6 479 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 SLITRK1Q96PX8 696 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 ACOX2Q99424 681 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 CDC6Q99741 560 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 FAM213AQ9BRX8 229 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 STRA6Q9BX79 667 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 IL21RQ9HBE5 538 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 SPHK2Q9NRA0 654 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 TM7SF3Q9NS93 570 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 PCDHGB2Q9Y5G2 931 aa9.26□□□□□ -0.93
BRIP1-204ENST00000579028 URB1O60287 2271 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 ACACAQ13085 2346 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 DSPP15924 2871 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 MEI4A8MW99 385 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 E9PAM4 449 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 GFRA2O00451 464 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 TRIM24O15164 1050 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 ATXN7O15265 892 aaPredicted RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 FLRT2O43155 660 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 COCHO43405 550 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 CILPO75339 1184 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 CER1O95813 267 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 KRT19P08727 400 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 ATXN1LP0C7T5 689 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 WARSP23381 471 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 CD6P30203 668 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 MATKP42679 507 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 ABCG1P45844 678 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 BNC1Q01954 994 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 CYP27A1Q02318 531 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 MYO1EQ12965 1108 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 GRAMD4Q6IC98 578 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 IL27RAQ6UWB1 636 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 TMEM25Q86YD3 366 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 BBS7Q8IWZ6 715 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 CHPFQ8IZ52 775 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 LSM14AQ8ND56 463 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 PDZD8Q8NEN9 1154 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 CADM4Q8NFZ8 388 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 OVCA2Q8WZ82 227 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 SAAL1Q96ER3 474 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 FAM84AQ96KN4 292 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 MTMR12Q9C0I1 747 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 SLC6A17Q9H1V8 727 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 GAREM1Q9H706 876 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 TMEM30AQ9NV96 361 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 WSB2Q9NYS7 404 aaPredicted RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 RBAKQ9NYW8 714 aaPredicted RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 USP36Q9P275 1121 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 FNDC3AQ9Y2H6 1198 aaKnown RBP9.25□□□□□ -0.93
BRIP1-204ENST00000579028 SH3BP1Q9Y3L3 701 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 NBEAQ8NFP9 2946 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 APC2O95996 2303 aa9.25□□□□□ -0.93
BRIP1-204ENST00000579028 PRRT4C9JH25 899 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 CACNG3O60359 315 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 PDGFRBP09619 1106 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 TMEM191BP0C7N4 346 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 PLA2G2AP14555 144 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 GARTP22102 1010 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 UBA7P41226 1012 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 TUBP50607 506 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 CACNA2D1P54289 1103 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 KCNA1Q09470 495 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 ANO4Q32M45 955 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 MDH1BQ5I0G3 518 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 SNX30Q5VWJ9 437 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 KIAA1324Q6UXG2 1013 aaKnown RBP9.24□□□□□ -0.93
BRIP1-204ENST00000579028 SFR1Q86XK3 245 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 MARCH9Q86YJ5 346 aa9.24□□□□□ -0.93
BRIP1-204ENST00000579028 ZCCHC9Q8N567 271 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms