RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 MED7O43513 233 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 TLR5O60602 858 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 MBL2P11226 248 aaPredicted RBP22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 SRFP11831 508 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 PBX1P40424 430 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 ZNF77Q15935 545 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 HECTD3Q5T447 861 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 SIX6OS1Q8N1H7 587 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 TTC8Q8TAM2 541 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 SH3RF2Q8TEC5 729 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 KCTD13Q8WZ19 329 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 OVCA2Q8WZ82 227 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 EDAQ92838 391 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 PIWIL1Q96J94 861 aaKnown RBP22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 ZFRQ96KR1 1074 aaKnown RBP22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 UBXN6Q9BZV1 441 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 TLR8Q9NR97 1041 aaKnown RBP22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 TDP1Q9NUW8 608 aa22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 NOCTQ9UK39 431 aaKnown RBP22.82■■□□□ 1.24
CDC42EP4-203ENST00000578516 YJEFN3A6XGL0 299 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 E5RJQ4 531 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 E7ENQ6 273 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 ZBED1O96006 694 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 IRF1P10914 325 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 RARGP13631 454 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 CHRNB2P17787 502 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 PDE6CP51160 858 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 DAOAP59103 153 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 TNK2Q07912 1038 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 PDCLQ13371 301 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 TRIM68Q6AZZ1 485 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 BPIFB1Q8TDL5 484 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 NXPE3Q969Y0 559 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 CPXM1Q96SM3 734 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 TTYH3Q9C0H2 523 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 PCDHGC3Q9UN70 934 aa22.81■■□□□ 1.24
CDC42EP4-203ENST00000578516 A0A1W2PQC6 194 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 PSMC3P17980 439 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 STAT1P42224 750 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 YWHAGP61981 247 aaKnown RBP eCLIP22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 SNX30Q5VWJ9 437 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 CACNA2D4Q7Z3S7 1137 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 MFSD6LQ8IWD5 586 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 CELF5Q8N6W0 485 aaKnown RBP22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 EDEM1Q92611 657 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 TRMT61BQ9BVS5 477 aaKnown RBP22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 GKN1Q9NS71 199 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 ARHGAP26Q9UNA1 814 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 WNT6Q9Y6F9 365 aa22.8■■□□□ 1.24
CDC42EP4-203ENST00000578516 TRIOO75962 3097 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 KRBA1A5PL33 1030 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 LRRC53A6NM62 1247 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 LEFTY2O00292 366 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 ERBB2P04626 1255 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 ALADP13716 330 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 ARSAP15289 507 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 WEE1P30291 646 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 KRT9P35527 623 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 PPP3CCP48454 512 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 SIGLEC14Q08ET2 396 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 PTPN20Q4JDL3 420 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 C2CD6Q53TS8 623 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 PM20D1Q6GTS8 502 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 TRIM67Q6ZTA4 783 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 DEPDC1BQ8WUY9 529 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 SLC4A5Q9BY07 1137 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 BRD9Q9H8M2 597 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 CYLDQ9NQC7 956 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 CFAP97Q9P2B7 532 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 KMT2EQ8IZD2 1858 aa22.79■■□□□ 1.24
CDC42EP4-203ENST00000578516 TMEM221A6NGB7 291 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 M0R296 226 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 ARNTLO00327 626 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 PAPSS1O43252 624 aaPredicted RBP22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 SOX9P48436 509 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 SLC7A9P82251 487 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 FMO1Q01740 532 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 FCHO2Q0JRZ9 810 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 ZNF268Q14587 947 aaPredicted RBP22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 MTF1Q14872 753 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 C10orf120Q5SQS8 335 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 SCUBE3Q8IX30 993 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 YAF2Q8IY57 180 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 UBALD2Q8IYN6 164 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 OLIG1Q8TAK6 271 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 PCDHB18PQ96TA0 734 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 NACA2Q9H009 215 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 SLC2A4RGQ9NR83 387 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 HEBP1Q9NRV9 189 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 RASAL2Q9UJF2 1139 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 FBXL21Q9UKT6 434 aa22.78■■□□□ 1.24
CDC42EP4-203ENST00000578516 ZNF263O14978 683 aa22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 RPL34P49207 117 aaKnown RBP22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 TUBP50607 506 aa22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 BPIFB4P59827 614 aa22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 PLCB2Q00722 1185 aa22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 NAA35Q5VZE5 725 aa22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 SIX5Q8N196 739 aa22.77■■□□□ 1.24
CDC42EP4-203ENST00000578516 HSFY1Q96LI6 401 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms