RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 BEND7Q8N7W2 519 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF614Q8N883 585 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 HJURPQ8NCD3 748 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 BLOC1S5Q8TDH9 187 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 METTL21AQ8WXB1 218 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 BRI3BPQ8WY22 251 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PRCCQ92733 491 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PTPRN2Q92932 1015 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MAML3Q96JK9 1138 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 REEP2Q9BRK0 252 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 CCSER1Q9C0I3 900 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 STRADBQ9C0K7 418 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 BRD8Q9H0E9 1235 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 NEUROD4Q9HD90 331 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PHPT1Q9NRX4 125 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 FAM105AQ9NUU6 356 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 GTSE1Q9NYZ3 720 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 AHSPQ9NZD4 102 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 CD274Q9NZQ7 290 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 BTBD7Q9P203 1132 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 CEP72Q9P209 647 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 EPS15L1Q9UBC2 864 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 KLF15Q9UIH9 416 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 DNPEPQ9ULA0 475 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PIK3C2BO00750 1634 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 LMTK2Q8IWU2 1503 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RBBP6Q7Z6E9 1792 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 NFKBIEO00221 500 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 DNM1LO00429 736 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 AVILO75366 819 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RHOBTB1O94844 696 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 EPHX1P07099 455 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 C8AP07357 584 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ITGB8P26012 769 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 GDI1P31150 447 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 GPR1P46091 355 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 NRIP1P48552 1158 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 CENPAP49450 140 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ILF3Q12906 894 aaKnown RBP eCLIP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RESTQ13127 1097 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 KRT72Q14CN4 511 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 NECTIN1Q15223 517 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PUS10Q3MIT2 529 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TREML2Q5T2D2 321 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ALKBH2Q6NS38 261 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ZPBP2Q6X784 338 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 LBX2Q6XYB7 198 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TSHZ1Q6ZSZ6 1077 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 USP45Q70EL2 814 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ZC3H18Q86VM9 953 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 VSIG10LQ86VR7 867 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MAB21L3Q8N8X9 362 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PPTC7Q8NI37 304 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 UHMK1Q8TAS1 419 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MGARPQ8TDB4 240 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 JADE3Q92613 823 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ERLEC1Q96DZ1 483 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TSPAN18Q96SJ8 248 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 HEMGNQ9BXL5 484 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 XPO4Q9C0E2 1151 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 DUS2Q9NX74 493 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RNF14Q9UBS8 474 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ATP6V1HQ9UI12 483 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PADI3Q9ULW8 664 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 BARX2Q9UMQ3 279 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ABCA6Q8N139 1617 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 F5H423 210 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PEX12O00623 359 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CYP26A1O43174 497 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 VPS26AO75436 327 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PMPCBO75439 489 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TADA3O75528 432 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 KRT33AO76009 404 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 FTLP02792 175 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SYPP08247 313 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CXCL8P10145 99 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 GSPT1P15170 499 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 BDNFP23560 247 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ACAT1P24752 427 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 GRK2P25098 689 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 EIF4A3P38919 411 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC1A1P43005 524 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 NPTX2P47972 431 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SESN2P58004 480 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 LRRC74AQ0VAA2 488 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CNTN1Q12860 1018 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TRIP13Q15645 432 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TBC1D25Q3MII6 688 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 HDXQ7Z353 690 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TRAPPC11Q7Z392 1133 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 RABEPKQ7Z6M1 372 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SAPCD2Q86UD0 394 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 WDR49Q8IV35 697 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TAGAPQ8N103 731 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ANKLE1Q8NAG6 615 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 OR14C36Q8NHC7 312 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CEP70Q8NHQ1 597 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PXYLP1Q8TE99 480 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 KCNB2Q92953 911 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms