RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CEP83Q9Y592 693 aa10.61□□□□□ -0.71
CRLF3-202ENST00000577725 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 A0A0A6YYK5 440 aaPredicted RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 BUB1BO60566 1050 aaPredicted RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 GABBR2O75899 941 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 ATP1A1P05023 1023 aaKnown RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 ALDH2P05091 517 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 FAM163BP0C2L3 166 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 MMP8P22894 467 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 MTHFRP42898 656 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 GPD2P43304 727 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PDE4CQ08493 712 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PDCLQ13371 301 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 ZNF528Q3MIS6 628 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PKDCCQ504Y2 493 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PDE12Q6L8Q7 609 aaKnown RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PAQR9Q6ZVX9 377 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 FAM35AQ86V20 835 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 LRRTM3Q86VH5 581 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 FUKQ8N0W3 1084 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 ZNF564Q8TBZ8 553 aaPredicted RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 MYLPFQ96A32 169 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 TNIP3Q96KP6 325 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 NAPGQ99747 312 aaPredicted RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 VN1R3Q9BXE9 311 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 ZNF518BQ9C0D4 1074 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 HESX1Q9UBX0 185 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 DSEQ9UL01 958 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 CDH9Q9ULB4 789 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PACSIN2Q9UNF0 486 aaPredicted RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 SMG5Q9UPR3 1016 aaKnown RBP10.6□□□□□ -0.71
CRLF3-202ENST00000577725 MAST4O15021 2626 aa10.6□□□□□ -0.71
CRLF3-202ENST00000577725 PTPRDP23468 1912 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 CTAGE9A4FU28 777 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 E5RJQ4 531 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 BEST1O76090 585 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 URI1O94763 535 aaPredicted RBP10.59□□□□□ -0.71
CRLF3-202ENST00000577725 CALB1P05937 261 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 PCSK1P29120 753 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 CACNA2D1P54289 1103 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 ARPP19P56211 112 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 YWHAHQ04917 246 aaPredicted RBP10.59□□□□□ -0.71
CRLF3-202ENST00000577725 RING1Q06587 406 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 BST2Q10589 180 aaKnown RBP10.59□□□□□ -0.71
CRLF3-202ENST00000577725 MESDQ14696 234 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 STILQ15468 1287 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 OR6B2Q6IFH4 312 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 UNQ6494/PRO21346Q6UXR6 183 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 XYLT1Q86Y38 959 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 THEM5Q8N1Q8 247 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 RNF10Q8N5U6 811 aaKnown RBP10.59□□□□□ -0.71
CRLF3-202ENST00000577725 COLGALT1Q8NBJ5 622 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 TRIM11Q96F44 468 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 PCED1BQ96HM7 432 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 ALS2CR12Q96Q35 445 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 PKMYT1Q99640 499 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 HNRNPABQ99729 332 aaKnown RBP10.59□□□□□ -0.71
CRLF3-202ENST00000577725 SYNCQ9H7C4 482 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 PARD6AQ9NPB6 346 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 AVENQ9NQS1 362 aaPredicted RBP10.59□□□□□ -0.71
CRLF3-202ENST00000577725 KRT82Q9NSB4 513 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 TMEM30AQ9NV96 361 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 DLGAP2Q9P1A6 1054 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 WNT16Q9UBV4 365 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 PCDHGA2Q9Y5H1 932 aa10.59□□□□□ -0.71
CRLF3-202ENST00000577725 SF3B1O75533 1304 aaKnown RBP eCLIP10.58□□□□□ -0.71
CRLF3-202ENST00000577725 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 ARHGEF37A1IGU5 675 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 C1QTNF9BB2RNN3 333 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 TAF4O00268 1085 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 TRAPPC3O43617 180 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 AP1G2O75843 785 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 DCNP07585 359 aaKnown RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 C1QTNF9P0C862 333 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 MYBL1P10243 752 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 LCP1P13796 627 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 FGFR3P22607 806 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 PAX3P23760 479 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 BCAT1P54687 386 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 MAP3K7CLP57077 242 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 TSPY1Q01534 308 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 MAMLD1Q13495 774 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 CTXN3Q4LDR2 81 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 SLC39A12Q504Y0 691 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 N4BP2L1Q5TBK1 243 aaPredicted RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 PLEKHA7Q6IQ23 1121 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 KCNT2Q6UVM3 1135 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 PRSS55Q6UWB4 352 aaPredicted RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 FAM183BPQ6ZVS7 135 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 DAAM2Q86T65 1068 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 RHOT2Q8IXI1 618 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms