RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 CARD9Q9H257 536 aa16■□□□□ 0.15
SS18-206ENST00000577572 PLEKHA4Q9H4M7 779 aa16■□□□□ 0.15
SS18-206ENST00000577572 CYP4F11Q9HBI6 524 aa16■□□□□ 0.15
SS18-206ENST00000577572 ABCC13Q9NSE7 274 aa16■□□□□ 0.15
SS18-206ENST00000577572 CLIC5Q9NZA1 410 aa16■□□□□ 0.15
SS18-206ENST00000577572 CHORDC1Q9UHD1 332 aaPredicted RBP16■□□□□ 0.15
SS18-206ENST00000577572 YBX2Q9Y2T7 364 aaKnown RBP16■□□□□ 0.15
SS18-206ENST00000577572 HYOU1Q9Y4L1 999 aa16■□□□□ 0.15
SS18-206ENST00000577572 KIAA1671Q9BY89 1806 aa16■□□□□ 0.15
SS18-206ENST00000577572 PTPRDP23468 1912 aa16■□□□□ 0.15
SS18-206ENST00000577572 ENDOD1O94919 500 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 FTCDO95954 541 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 LTFP02788 710 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 USP17L7P0C7H9 530 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 MYOGP15173 224 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 ERVFC1P60507 584 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 GPM6BQ13491 265 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 DDR2Q16832 855 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 BHLHA9Q7RTU4 235 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 GPRIN1Q7Z2K8 1008 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 ITIH5Q86UX2 942 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 ZNF592Q92610 1267 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 CDK5RAP1Q96SZ6 601 aaKnown RBP15.99■□□□□ 0.15
SS18-206ENST00000577572 TBCBQ99426 244 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 CRISPLD1Q9H336 500 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 PRO3102Q9H379 93 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 SLC28A3Q9HAS3 691 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 ALG13Q9NP73 1137 aaKnown RBP15.99■□□□□ 0.15
SS18-206ENST00000577572 RRAGDQ9NQL2 400 aaPredicted RBP15.99■□□□□ 0.15
SS18-206ENST00000577572 UXTQ9UBK9 157 aaPredicted RBP15.99■□□□□ 0.15
SS18-206ENST00000577572 FBXW11Q9UKB1 542 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 SLC27A5Q9Y2P5 690 aa15.99■□□□□ 0.15
SS18-206ENST00000577572 YJEFN3A6XGL0 299 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 E7ENQ6 273 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 PIK3R2O00459 728 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 PRRG1O14668 218 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 CAPN9O14815 690 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 FANCGO15287 622 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 GLUD1P00367 558 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
SS18-206ENST00000577572 KRT7P08729 469 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 POU2F2P09086 479 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 KLRC2P26717 231 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 FLT3P36888 993 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 EPHB3P54753 998 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 AIF1P55008 147 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 AMPD2Q01433 879 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 OGDHQ02218 1023 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 ZNF252P-AS1Q0IIN9 211 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 MTA1Q13330 715 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 CCDC14Q49A88 953 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 SNX30Q5VWJ9 437 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 BSPRYQ5W0U4 402 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 PPP2R2DQ66LE6 453 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 CC2D1AQ6P1N0 951 aaPredicted RBP15.98■□□□□ 0.15
SS18-206ENST00000577572 BNIPLQ7Z465 357 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 TADA2BQ86TJ2 420 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 PSTKQ8IV42 348 aaKnown RBP15.98■□□□□ 0.15
SS18-206ENST00000577572 FAM149B1Q96BN6 582 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 PIWIL1Q96J94 861 aaKnown RBP15.98■□□□□ 0.15
SS18-206ENST00000577572 SLITRK1Q96PX8 696 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 NPY6RQ99463 290 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 L2HGDHQ9H9P8 463 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 TLR8Q9NR97 1041 aaKnown RBP15.98■□□□□ 0.15
SS18-206ENST00000577572 DDX56Q9NY93 547 aaKnown RBP15.98■□□□□ 0.15
SS18-206ENST00000577572 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 YIPF1Q9Y548 306 aa15.98■□□□□ 0.15
SS18-206ENST00000577572 SLC38A8A6NNN8 435 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 ENC1O14682 589 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 GRM6O15303 877 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 TGM5O43548 720 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 URI1O94763 535 aaPredicted RBP15.97■□□□□ 0.15
SS18-206ENST00000577572 SEC24AO95486 1093 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 ATF6P18850 670 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 DNAJB1P25685 340 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 HOXA9P31269 272 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 PEX5P50542 639 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 RWDD2BP57060 319 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
SS18-206ENST00000577572 YWHAGP61981 247 aaKnown RBP eCLIP15.97■□□□□ 0.15
SS18-206ENST00000577572 CAMK1Q14012 370 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 TAF5Q15542 800 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 WHAMMP3Q1A5X7 153 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 BOLA3Q53S33 107 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 DEFB106AQ8N104 65 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 EMC1Q8N766 993 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 SCAMP5Q8TAC9 235 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 MICAL1Q8TDZ2 1067 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 CLEC4CQ8WTT0 213 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 TEKT4Q8WW24 435 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 AUTS2Q8WXX7 1259 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 BTBD6Q96KE9 485 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
SS18-206ENST00000577572 OLA1Q9NTK5 396 aaKnown RBP15.97■□□□□ 0.15
SS18-206ENST00000577572 TTC7AQ9ULT0 858 aaPredicted RBP15.97■□□□□ 0.15
SS18-206ENST00000577572 INSL5Q9Y5Q6 135 aa15.97■□□□□ 0.15
SS18-206ENST00000577572 PATJQ8NI35 1801 aa15.96■□□□□ 0.15
SS18-206ENST00000577572 FAM170AA1A519 330 aa15.96■□□□□ 0.15
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