RNA–Protein interactions for RNA: ENST00000576872.1

CAMTA2-216, Transcript of calmodulin binding transcription activator 2, human

TSL 2

Gene CAMTA2, Length 985 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-216	ENST00000576872	ZFR	Q96KR1	1074 aa	Known RBP	18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	KCNH6	Q9H252	994 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	VPS16	Q9H269	839 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	EBF3	Q9H4W6	596 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	C8orf33	Q9H7E9	229 aa	Predicted RBP	18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	CYLD	Q9NQC7	956 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DUS2	Q9NX74	493 aa	Known RBP	18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DNAJC12	Q9UKB3	198 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	WNT6	Q9Y6F9	365 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MIA3	Q5JRA6	1907 aa		18.44	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FAM170B	A6NMN3	283 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	TBX18	O95935	607 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DCN	P07585	359 aa	Known RBP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ZNF18	P17022	549 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	IFNAR2	P48551	515 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	PSEN1	P49768	467 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	TKTL1	P51854	596 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NUBP1	P53384	320 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	RUNX3	Q13761	415 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ITPRIPL2	Q3MIP1	535 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	PRSS33	Q8NF86	280 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	SLC35F5	Q8WV83	523 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	KCTD13	Q8WZ19	329 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FAM3C	Q92520	227 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	SECISBP2L	Q93073	1101 aa	Known RBP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FUCA2	Q9BTY2	467 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	LSM14B	Q9BX40	385 aa	Known RBP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	OSBPL6	Q9BZF3	934 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ULBP1	Q9BZM6	244 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NAT10	Q9H0A0	1025 aa	Known RBP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	HSD3B7	Q9H2F3	369 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	LRRC4	Q9HBW1	653 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ACP6	Q9NPH0	428 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DLGAP2	Q9P1A6	1054 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	CFAP97	Q9P2B7	532 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	LIMA1	Q9UHB6	759 aa	Known RBP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NAGPA	Q9UK23	515 aa		18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MRPS17	Q9Y2R5	130 aa	Known RBP	18.43	■□□□□ 0.54
CAMTA2-216	ENST00000576872	OTOL1	A6NHN0	477 aa	Predicted RBP	18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	SPECC1L-ADORA2A	F8WAN1	911 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	LETM1	O95202	739 aa	Predicted RBP	18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	RARG	P13631	454 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	GNA15	P30679	374 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	CTH	P32929	405 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	USP8	P40818	1118 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	COPB1	P53618	953 aa	Known RBP	18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ADIG	Q0VDE8	80 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	EML3	Q32P44	896 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	KLHDC7A	Q5VTJ3	777 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	SMYD5	Q6GMV2	418 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	PM20D1	Q6GTS8	502 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	RALGPS2	Q86X27	583 aa	Predicted RBP	18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ZNF687	Q8N1G0	1237 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	KIAA1958	Q8N8K9	716 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NELL2	Q99435	816 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	BPIFA3	Q9BQP9	254 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NACA2	Q9H009	215 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	LINC00597	Q9H2U6	94 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	CLIC5	Q9NZA1	410 aa		18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NDRG2	Q9UN36	371 aa	Known RBP	18.42	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MUC6	Q6W4X9	2439 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	SYCE3	A1L190	88 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	GALR2	O43603	387 aa	Predicted RBP	18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ZBED1	O96006	694 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	TPM2	P07951	284 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ATP5C1	P36542	298 aa	Known RBP	18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	RGS7	P49802	495 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	PMF1	Q6P1K2	205 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	C1orf228	Q6PIY5	440 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	TXNDC11	Q6PKC3	985 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	BHLHA9	Q7RTU4	235 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ARHGAP18	Q8N392	663 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ZNF276	Q8N554	614 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DTWD2	Q8NBA8	298 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ANKRD20A12P	Q8NF67	263 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ZNF606	Q8WXB4	792 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NDRG1	Q92597	394 aa	Known RBP	18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ATP2A3	Q93084	1043 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	PRRX2	Q99811	253 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ECT2	Q9H8V3	914 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	NUDT5	Q9UKK9	219 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	ARIH1	Q9Y4X5	557 aa	Predicted RBP	18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FHOD1	Q9Y613	1164 aa		18.41	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FOXN3	O00409	490 aa	Predicted RBP	18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	SCAMP3	O14828	347 aa	Known RBP	18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MDM4	O15151	490 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	THAP12	O43422	761 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MED7	O43513	233 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	GABBR2	O75899	941 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	PNMA6A	P0CW24	399 aa	Predicted RBP	18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	RALA	P11233	206 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	LCP1	P13796	627 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	CDK11B	P21127	795 aa	Known RBP	18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FZD5	Q13467	585 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	MEA1	Q16626	185 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	FKBP15	Q5T1M5	1219 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	DENND1B	Q6P3S1	775 aa		18.4	■□□□□ 0.54
CAMTA2-216	ENST00000576872	KLHDC10	Q6PID8	442 aa		18.4	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms