RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TFAP2BQ92481 460 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
RPAIN-216ENST00000575599 NDST4Q9H3R1 872 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 EBF3Q9H4W6 596 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 TLR8Q9NR97 1041 aaKnown RBP13.97□□□□□ -0.17
RPAIN-216ENST00000575599 SCML2Q9UQR0 700 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 MTF2Q9Y483 593 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-216ENST00000575599 WNT6Q9Y6F9 365 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 MIA3Q5JRA6 1907 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 GTPBP10A4D1E9 387 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 FAM170BA6NMN3 283 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 LEFTY2O00292 366 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 TULP2O00295 520 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 O00370 1275 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 MAN2B1O00754 1011 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 SCAMP3O14828 347 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 ZDHHC11BP0C7U3 371 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 ARSAP15289 507 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 TARSP26639 723 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 EEF1GP26641 437 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 PON1P27169 355 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 IFNAR2P48551 515 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 MRE11P49959 708 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 KIF11P52732 1056 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 MFAP3P55082 362 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 SLC7A9P82251 487 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 ZXDBP98169 803 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 PDE4CQ08493 712 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 BST2Q10589 180 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 IQCB1Q15051 598 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 ARHGAP44Q17R89 818 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 ITPRIPL2Q3MIP1 535 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 TCP11X2Q5H9J9 407 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 MIIPQ5JXC2 388 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 DHX40Q8IX18 779 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 FAM3CQ92520 227 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 HPS4Q9NQG7 708 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 DUS2Q9NX74 493 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 TAB2Q9NYJ8 693 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 APEX2Q9UBZ4 518 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 KIAA1257Q9ULG3 409 aa13.96□□□□□ -0.17
RPAIN-216ENST00000575599 MRPS17Q9Y2R5 130 aaKnown RBP13.96□□□□□ -0.17
RPAIN-216ENST00000575599 A0A1W2PQH9 124 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 SHISA7A6NL88 538 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 M0QYV0 167 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 XPO1O14980 1071 aaKnown RBP13.96□□□□□ -0.18
RPAIN-216ENST00000575599 TLR5O60602 858 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 CTHP32929 405 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 USP8P40818 1118 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 TUBP50607 506 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 ZNF132P52740 706 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 RUNX3Q13761 415 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 PDGFRLQ15198 375 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 ENOSF1Q7L5Y1 443 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 OSCP1Q8WVF1 389 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 PRRX2Q99811 253 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 ZSWIM1Q9BR11 485 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 KCNH6Q9H252 994 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 C8orf33Q9H7E9 229 aaPredicted RBP13.96□□□□□ -0.18
RPAIN-216ENST00000575599 NMUR1Q9HB89 426 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 OSER1Q9NX31 292 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 CFAP97Q9P2B7 532 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 NAGPAQ9UK23 515 aa13.96□□□□□ -0.18
RPAIN-216ENST00000575599 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.18
RPAIN-216ENST00000575599 OTOL1A6NHN0 477 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-216ENST00000575599 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 IRF1P10914 325 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 GLULP15104 373 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 TCF3P15923 654 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 TKTL1P51854 596 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 LCLAT1Q6UWP7 414 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 CCDC186Q7Z3E2 898 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 RALGPS2Q86X27 583 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-216ENST00000575599 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.18
RPAIN-216ENST00000575599 CPA6Q8N4T0 437 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 DTWD2Q8NBA8 298 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 SECISBP2LQ93073 1101 aaKnown RBP13.95□□□□□ -0.18
RPAIN-216ENST00000575599 MSANTD3Q96H12 275 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 FAM81BQ96LP2 452 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 NELL2Q99435 816 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 UBXN6Q9BZV1 441 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 LRRC4Q9HBW1 653 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 FANCLQ9NW38 375 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 AJAP1Q9UKB5 411 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-216ENST00000575599 NUDT5Q9UKK9 219 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 USP3Q9Y6I4 520 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
RPAIN-216ENST00000575599 MDM4O15151 490 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 NCAM2O15394 837 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 TBX18O95935 607 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 TPM2P07951 284 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 RARGP13631 454 aa13.94□□□□□ -0.18
RPAIN-216ENST00000575599 PLA2G4AP47712 749 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms