RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 IRGQQ8WZA9 623 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 FBXW11Q9UKB1 542 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 COL4A4P53420 1690 aaPredicted RBP25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 MYO16Q9Y6X6 1858 aa25.19■■□□□ 1.62
ATPAF1-213ENST00000574428 RFXAPO00287 272 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 CLCN4P51793 760 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 TWF1Q12792 350 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 PEX26Q7Z412 305 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 NT5DC3Q86UY8 548 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 SCML4Q8N228 414 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 FNIP1Q8TF40 1166 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 CFAP57Q96MR6 1250 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 FBXO44Q9H4M3 255 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 ASNSD1Q9NWL6 643 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 IL37Q9NZH6 218 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 SCML2Q9UQR0 700 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 USTQ9Y2C2 406 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 JRKLQ9Y4A0 524 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 DAB1O75553 588 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 RTN3O95197 1032 aaPredicted RBP25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 LTFP02788 710 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 TUBB4AP04350 444 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 ATP1A1P05023 1023 aaKnown RBP25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 GLI1P08151 1106 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 YWHAQP27348 245 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 PGFP49763 221 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 ZNF143P52747 638 aaPredicted RBP25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 DEFB106AQ8N104 65 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 KREMEN2Q8NCW0 462 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 NAPGQ99747 312 aaPredicted RBP25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 POPDC2Q9HBU9 364 aa25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 MAGED2Q9UNF1 606 aaPredicted RBP25.18■■□□□ 1.62
ATPAF1-213ENST00000574428 ATG2AQ2TAZ0 1938 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 TRANK1O15050 2925 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 CTAGE9A4FU28 777 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 PER2O15055 1255 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 SPOPO43791 374 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 CLASP2O75122 1294 aaKnown RBP25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 FYNP06241 537 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 DNA2P51530 1060 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 C15orf59Q2T9L4 293 aaPredicted RBP25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 MEI1Q5TIA1 1274 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 ARCQ7LC44 396 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 FBXO32Q969P5 355 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 GMIPQ9P107 970 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 AMFRQ9UKV5 643 aa25.17■■□□□ 1.62
ATPAF1-213ENST00000574428 GREB1Q4ZG55 1949 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 SDC4P31431 198 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 PIGHQ14442 188 aaPredicted RBP25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 CCDC14Q49A88 953 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 DCAF6Q58WW2 860 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 BSPRYQ5W0U4 402 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 ADGRD2Q7Z7M1 963 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 SCD5Q86SK9 330 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 RBM23Q86U06 439 aaKnown RBP25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 NIPA2Q8N8Q9 360 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 MYRIPQ8NFW9 859 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 KIF18AQ8NI77 898 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 EDEM1Q92611 657 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 GOLGA1Q92805 767 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 CEP295NLQ96MC4 621 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 SLC2A13Q96QE2 648 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 CNPY3Q9BT09 278 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 LMAN2LQ9H0V9 348 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 NAALADL1Q9UQQ1 740 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 UQCRHLA0A096LP55 91 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 A0A1W2PQH9 124 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 DPYSL4O14531 572 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 RIOK3O14730 519 aaKnown RBP25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 C8AP07357 584 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 UQCRHP07919 91 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 MAN1A1P33908 653 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 MATKP42679 507 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 YWHAGP61981 247 aaKnown RBP eCLIP25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 ATP11AP98196 1134 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 TAF10Q12962 218 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 CDO1Q16878 200 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 SH3PXD2AQ5TCZ1 1133 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 SYPL2Q5VXT5 272 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 TLR10Q9BXR5 811 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 NMUR1Q9HB89 426 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 LCMT1Q9UIC8 334 aa25.16■■□□□ 1.62
ATPAF1-213ENST00000574428 FAM92AA1XBS5 289 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 CAPN9O14815 690 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 NCAM1P13591 858 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 TFE3P19532 575 aaPredicted RBP25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 VEPH1Q14D04 833 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 RAB6CQ53S08 254 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 CCDC149Q6ZUS6 474 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 DDX23Q9BUQ8 820 aaKnown RBP25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 ADAM33Q9BZ11 813 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 RAB6CQ9H0N0 254 aa25.15■■□□□ 1.62
ATPAF1-213ENST00000574428 EPCAMP16422 314 aa25.14■■□□□ 1.62
ATPAF1-213ENST00000574428 HMGA1P17096 107 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-213ENST00000574428 SLC1A1P43005 524 aa25.14■■□□□ 1.62
ATPAF1-213ENST00000574428 SSR1P43307 286 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-213ENST00000574428 EPHB3P54753 998 aa25.14■■□□□ 1.62
ATPAF1-213ENST00000574428 ARFGAP1Q8N6T3 406 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms