RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 NUSAP1Q9BXS6 441 aaKnown RBP12.91□□□□□ -0.34
CCDC40-210ENST00000573903 IMPG2Q9BZV3 1241 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 DNAI2Q9GZS0 605 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 FBXO44Q9H4M3 255 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 DEC1Q9P2X7 70 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-210ENST00000573903 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 TCRBV21S2A2A0A5A6 115 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 SGK1O00141 431 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 IRF1P10914 325 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 P2RY2P41231 377 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 PIK3CAP42336 1068 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 LMAN2Q12907 356 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 SNX30Q5VWJ9 437 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 ACOT1Q86TX2 421 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 ZNF513Q8N8E2 541 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-210ENST00000573903 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 TAF4BQ92750 862 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 GZF1Q9H116 711 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-210ENST00000573903 CCSER2Q9H7U1 834 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 TLR8Q9NR97 1041 aaKnown RBP12.9□□□□□ -0.34
CCDC40-210ENST00000573903 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 GMIPQ9P107 970 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.34
CCDC40-210ENST00000573903 FRMD4BQ9Y2L6 1034 aa12.9□□□□□ -0.34
CCDC40-210ENST00000573903 PLXND1Q9Y4D7 1925 aa12.9□□□□□ -0.35
CCDC40-210ENST00000573903 TPRP12270 2363 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 TNFRSF10BO14763 440 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 TLR5O60602 858 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 TULP3O75386 442 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 KIF20AO95235 890 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 SLFN14P0C7P3 912 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 CCDC130P13994 396 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 CLDN10P78369 228 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 ZNF252P-AS1Q0IIN9 211 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 C10orf76Q5T2E6 689 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 CEP135Q66GS9 1140 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 SDE2Q6IQ49 451 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 ARMCX6Q7L4S7 300 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 UNC93AQ86WB7 457 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 SLC9A9Q8IVB4 645 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 SFTPA1Q8IWL2 248 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 BBS7Q8IWZ6 715 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 GRAMD1CQ8IYS0 662 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 SLC2A14Q8TDB8 520 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 KCNV2Q8TDN2 545 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 RLN3Q8WXF3 142 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 CCDC47Q96A33 483 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 ZFRQ96KR1 1074 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 XPO6Q96QU8 1125 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 SERTAD1Q9UHV2 236 aa12.89□□□□□ -0.35
CCDC40-210ENST00000573903 EVLQ9UI08 416 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-210ENST00000573903 ACACBO00763 2458 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 A0A0A0MRY4 1105 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 FAM92AA1XBS5 289 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 ANTXRLA6NF34 631 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 PDXKO00764 312 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 AP5Z1O43299 807 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 CALUO43852 315 aaPredicted RBP12.88□□□□□ -0.35
CCDC40-210ENST00000573903 NR3C1P04150 777 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 HOXB2P14652 356 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 NDST1P52848 882 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 MAP3K7CLP57077 242 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 UAP1L1Q3KQV9 507 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 ZACNQ401N2 412 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 SH3PXD2AQ5TCZ1 1133 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 LYSMD4Q5XG99 296 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 GRAMD4Q6IC98 578 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 SLC36A4Q6YBV0 504 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 SYT12Q8IV01 421 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 ETFBKMTQ8IXQ9 262 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 TMEFF1Q8IYR6 380 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 FUKQ8N0W3 1084 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 TERB1Q8NA31 727 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 KIAA0895Q8NCT3 520 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 TMC2Q8TDI7 906 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
CCDC40-210ENST00000573903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms