RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 DUSP9Q99956 384 aaKnown RBP23.31■■□□□ 1.32
SNF8-216ENST00000573795 MED10Q9BTT4 135 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 MBD1Q9UIS9 605 aaPredicted RBP23.31■■□□□ 1.32
SNF8-216ENST00000573795 HCN2Q9UL51 889 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 ATP8B3O60423 1300 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 CDX4O14627 284 aaPredicted RBP23.3■■□□□ 1.32
SNF8-216ENST00000573795 HOXC11O43248 304 aaPredicted RBP23.3■■□□□ 1.32
SNF8-216ENST00000573795 BEST1O76090 585 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 F13A1P00488 732 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 ZSCAN22P10073 491 aaPredicted RBP23.3■■□□□ 1.32
SNF8-216ENST00000573795 TNFRSF4P43489 277 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 TUBP50607 506 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 ORC1Q13415 861 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 ACOT1Q86TX2 421 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 BBS7Q8IWZ6 715 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 TMEM174Q8WUU8 243 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 OTUB2Q96DC9 234 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 KRT82Q9NSB4 513 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 SERTAD1Q9UHV2 236 aa23.3■■□□□ 1.32
SNF8-216ENST00000573795 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.29■■□□□ 1.32
SNF8-216ENST00000573795 KHNYNO15037 678 aaKnown RBP23.29■■□□□ 1.32
SNF8-216ENST00000573795 ACTN4O43707 911 aaKnown RBP23.29■■□□□ 1.32
SNF8-216ENST00000573795 GREM1O60565 184 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 AP1G2O75843 785 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 ALDH1A2O94788 518 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 CCDC130P13994 396 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 ME1P48163 572 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 DHPSP49366 369 aaPredicted RBP23.29■■□□□ 1.32
SNF8-216ENST00000573795 AP3M2P53677 418 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 GAD2Q05329 585 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 MAP7D1Q3KQU3 841 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 EOGTQ5NDL2 527 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 SLC9A9Q8IVB4 645 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 NAT16Q8N8M0 369 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 GOLGA5Q8TBA6 731 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 WHAMMQ8TF30 809 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 SNX21Q969T3 373 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 TNIP3Q96KP6 325 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 KCTD10Q9H3F6 313 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 FAM13BQ9NYF5 915 aa23.29■■□□□ 1.32
SNF8-216ENST00000573795 WDFY3Q8IZQ1 3526 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 ASCC3Q8N3C0 2202 aaKnown RBP23.28■■□□□ 1.32
SNF8-216ENST00000573795 CEP192Q8TEP8 1941 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 TRIM24O15164 1050 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 TULP3O75386 442 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 NOVA1P51513 510 aaKnown RBP23.28■■□□□ 1.32
SNF8-216ENST00000573795 IRX4P78413 519 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 PKP1Q13835 747 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 ZACNQ401N2 412 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 C1orf220Q5T0J3 134 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 TMEM25Q86YD3 366 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 PIGKQ92643 395 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 CSNK1G1Q9HCP0 422 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 POLMQ9NP87 494 aaPredicted RBP23.28■■□□□ 1.32
SNF8-216ENST00000573795 TMEM9BQ9NQ34 198 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 COMMD8Q9NX08 183 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 SH3BP1Q9Y3L3 701 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 GON4LQ3T8J9 2241 aa23.28■■□□□ 1.32
SNF8-216ENST00000573795 PI4KAP42356 2102 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 IRF1P10914 325 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 PTGER3P43115 390 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 NDST1P52848 882 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 CRYBG2Q8N1P7 616 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 SLC2A14Q8TDB8 520 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 HMGB4Q8WW32 186 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 SPHK2Q9NRA0 654 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 TMEM74BQ9NUR3 256 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 EVLQ9UI08 416 aaPredicted RBP23.27■■□□□ 1.32
SNF8-216ENST00000573795 WASF3Q9UPY6 502 aa23.27■■□□□ 1.32
SNF8-216ENST00000573795 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 TCRBV21S2A2A0A5A6 115 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 SLFN14P0C7P3 912 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 ASPAP45381 313 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 KMT5BQ4FZB7 885 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 DAB2IPQ5VWQ8 1189 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 SPOPLQ6IQ16 392 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 ARMCX6Q7L4S7 300 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 GPRIN1Q7Z2K8 1008 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 MIB1Q86YT6 1006 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 TMEFF1Q8IYR6 380 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 C12orf29Q8N999 325 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 TERB1Q8NA31 727 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 PAGE5Q96GU1 130 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 ZZEF1O43149 2961 aa23.26■■□□□ 1.31
SNF8-216ENST00000573795 TLR5O60602 858 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 CLSTN1O94985 981 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 TBX18O95935 607 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 ASS1P00966 412 aaKnown RBP23.25■■□□□ 1.31
SNF8-216ENST00000573795 MAP3K7CLP57077 242 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 SV2AQ7L0J3 742 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 LPCAT2Q7L5N7 544 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 CEP57L1Q8IYX8 460 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 ZNF513Q8N8E2 541 aaPredicted RBP23.25■■□□□ 1.31
SNF8-216ENST00000573795 SPACA7Q96KW9 195 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 TWNKQ96RR1 684 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 KLF16Q9BXK1 252 aaPredicted RBP23.25■■□□□ 1.31
SNF8-216ENST00000573795 CD248Q9HCU0 757 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 FAM49BQ9NUQ9 324 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 EXOC1Q9NV70 894 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms