RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 ETFBKMTQ8IXQ9 262 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 CRYBG2Q8N1P7 616 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 SCAMP5Q8TAC9 235 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 DNAI2Q9GZS0 605 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 CSNK1G1Q9HCP0 422 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
TSR1-202ENST00000571806 DMAC2Q9NW81 257 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 PCDHA7Q9UN72 937 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 LAMA1P25391 3075 aa16.46■□□□□ 0.23
TSR1-202ENST00000571806 LRRIQ3A6PVS8 624 aaPredicted RBP16.45■□□□□ 0.22
TSR1-202ENST00000571806 PDXKO00764 312 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 AP1G2O75843 785 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 SLFN14P0C7P3 912 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
TSR1-202ENST00000571806 BCKDHBP21953 392 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 AFMP43652 599 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 CASP4P49662 377 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 IRX4P78413 519 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 SLC36A4Q6YBV0 504 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 HTR3DQ70Z44 454 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 C12orf40Q86WS4 652 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 PGBD3Q8N328 593 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 PHTF2Q8N3S3 785 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 ZNF513Q8N8E2 541 aaPredicted RBP16.45■□□□□ 0.22
TSR1-202ENST00000571806 TMC2Q8TDI7 906 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 PIGKQ92643 395 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 SNX21Q969T3 373 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 BACH2Q9BYV9 841 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 KRT82Q9NSB4 513 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
TSR1-202ENST00000571806 TCRBV21S2A2A0A5A6 115 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 CDX4O14627 284 aaPredicted RBP16.44■□□□□ 0.22
TSR1-202ENST00000571806 AP5Z1O43299 807 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 TLR5O60602 858 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 ADAM23O75077 832 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 TULP3O75386 442 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 KIF20AO95235 890 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 CHRM1P11229 460 aaPredicted RBP16.44■□□□□ 0.22
TSR1-202ENST00000571806 ATP5C1P36542 298 aaKnown RBP16.44■□□□□ 0.22
TSR1-202ENST00000571806 KDSRQ06136 332 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 ANO4Q32M45 955 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 ZACNQ401N2 412 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 TRIM61Q5EBN2 209 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 EMC10Q5UCC4 262 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 SDE2Q6IQ49 451 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 RABEPKQ7Z6M1 372 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 BBS7Q8IWZ6 715 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 TERB1Q8NA31 727 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 CEP76Q8TAP6 659 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 HMGB4Q8WW32 186 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 XPO6Q96QU8 1125 aaKnown RBP16.44■□□□□ 0.22
TSR1-202ENST00000571806 CCSER2Q9H7U1 834 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.44■□□□□ 0.22
TSR1-202ENST00000571806 GMIPQ9P107 970 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 LSM7Q9UK45 103 aaKnown RBP16.44■□□□□ 0.22
TSR1-202ENST00000571806 CIZ1Q9ULV3 898 aaPredicted RBP16.44■□□□□ 0.22
TSR1-202ENST00000571806 FRMD4BQ9Y2L6 1034 aa16.44■□□□□ 0.22
TSR1-202ENST00000571806 SCAMP3O14828 347 aaKnown RBP16.43■□□□□ 0.22
TSR1-202ENST00000571806 MAPK13O15264 365 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 ZNF217O75362 1048 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 VNN1O95497 513 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 F13A1P00488 732 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
TSR1-202ENST00000571806 HNRNPLP14866 589 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSR1-202ENST00000571806 CASP1P29466 404 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 NTSR1P30989 418 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 MESP2Q0VG99 397 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 STK4Q13043 487 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 PEAR1Q5VY43 1037 aaPredicted RBP16.43■□□□□ 0.22
TSR1-202ENST00000571806 LYSMD4Q5XG99 296 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 KLHDC10Q6PID8 442 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 SLC23A3Q6PIS1 610 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 NAT16Q8N8M0 369 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 IMPG2Q9BZV3 1241 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 SLC32A1Q9H598 525 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 CYLDQ9NQC7 956 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 ABCA7Q8IZY2 2146 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 PLXND1Q9Y4D7 1925 aa16.43■□□□□ 0.22
TSR1-202ENST00000571806 CNOT1A5YKK6 2376 aaKnown RBP16.42■□□□□ 0.22
TSR1-202ENST00000571806 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 PATE3B3GLJ2 98 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 ASS1P00966 412 aaKnown RBP16.42■□□□□ 0.22
TSR1-202ENST00000571806 PROS1P07225 676 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 FAM200BP0CF97 657 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 NDST1P52848 882 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 MAP3K7CLP57077 242 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 C10orf76Q5T2E6 689 aa16.42■□□□□ 0.22
TSR1-202ENST00000571806 GRAMD4Q6IC98 578 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms